Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00189 ATGGGTGACGAAAAGACAGCATTTGATCATCCTTCCAAAATTGAACCAAAGCGGTCTCGTCACTGGTTTGTTGATTCTGCTGAAATAGATTCTTTACCAAACAAGAAACAAGCTACAGAAGATGCTAATGGAAAATCAAGTTCAGGATTATCAAATGCGTTTACATCTTGGGAGAGCAATTCTTCTGTTGATTCCATTCCAATCCAGTTTATTGGCCGATCTTTTAGATCTGAAACTAGGCCTTGCAATTTCGGTGAAAAGAAAACTCTTTTTGTGGCTGATGATCTCAACGCACGAACAGAAATGATTTATGGGGAAGATTCCTCTTTTGATTTGTCTATATCCCATTCCGTTCAAGATTCTGATACATGTCTGGGTTTCAGTGGAATTAATAGAGTTAAAGTCGATGGTGTTAAAGATTGTAATCTTAACACACAGAATGTTGGCAGTCTACATCAGGCTTATAACAGAGAACCTGATGCACGATCTGTGTCAATGGGGCAGGATGTCACAAATGTAATTTCTTTTGGTGGGTTCCTAGATGAACAGGATGTCATCCCTGTGAACAGGCCAGCTGGAGATTATGATCCGTTATACAATCAATCTTCAGTTGAAGTGTCATTAGCAGCTCACAAAACAGAGACGGATATTTCAAATTCCAATGCAGTTGTAAATTCTCCTCAGTTGGCTAAACTTAAGCCCGAATCTCTGTCAAAAACTAGTCCAGAGGTCAAAGTAACAAGAAAAGGAGTTCCAAATAGTTTCCCTTCCAACGTCAGAAACTTGATTTCTACTGGTATGCTAGATGGAGTTCCTGTAAAGTACATCTCAGTAGCAGGGGAGGAACTCCCTGGAGTTATTAAAGGTTTTGGCTATCTTTGTGGTTGTCAGTCATGCGATTATACCAAGGTTCTAAATGCTCACGAGTTTGAGACACATGCTGGTTGCAAAACAAAACACCCACACAAGCACATTTACTTTGAGAACGGGAAGACCATTTATCAAATAGTTCAGGAATTGAAGAATACCCCTGAAAGTTTGTTGGTTGATACAATTCAAACAGTTCTTGGTTCACAAATTAATCAGAAAGCATTTCACATTTGGAAAGAATCATTTCAAGCAGCAACCCGTGAGCTTCAGCGGATTTACGGAAAGGAAGTACTAAATATATGA 1173 0.3922 MGDEKTAFDHPSKIEPKRSRHWFVDSAEIDSLPNKKQATEDANGKSSSGLSNAFTSWESNSSVDSIPIQFIGRSFRSETRPCNFGEKKTLFVADDLNARTEMIYGEDSSFDLSISHSVQDSDTCLGFSGINRVKVDGVKDCNLNTQNVGSLHQAYNREPDARSVSMGQDVTNVISFGGFLDEQDVIPVNRPAGDYDPLYNQSSVEVSLAAHKTETDISNSNAVVNSPQLAKLKPESLSKTSPEVKVTRKGVPNSFPSNVRNLISTGMLDGVPVKYISVAGEELPGVIKGFGYLCGCQSCDYTKVLNAHEFETHAGCKTKHPHKHIYFENGKTIYQIVQELKNTPESLLVDTIQTVLGSQINQKAFHIWKESFQAATRELQRIYGKEVLNI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00189 390 Pfam Tify domain binding domain 285 340 IPR032308 -
Accr13g00189 390 PANTHER AUTOIMMUNE REGULATOR 8 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00189 Accr-Chr13 1706732 1708165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00189 234 373 PHD Transcription Factor Family AT3G53680 48.227 1.18e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00189 - - gmx:100802229 499.204