Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00176 ATGGCGAAGACATTAATTTCCTCTCCTTCGTTTATCGGCACGCCTCTTCCTTCTGTCTCTCGCCTTGGTCTACACTCCTTCCCTCTCCCTCATCGTAAGCTGGTCAGCACCCGAGTTAGATTCAGCCTCCACGAAATCCCCCCTATTCACTCCCTCACTGATTCATTTGACTTCAGTCAAATCGTTACTAGAGCTGAAGCGCTTCTTTATACGCTTGCTGATGCCGCGGTTTCCGCCGATTCAGGTGCTGGTGCTGCGGCATCGACCTCCACAGATGCTGCTGCACAGAAGAACGGAGGCTGGTTCGGTTTTATTTCTGAAGCCATGGAATTTGTTCTTAAGGTGTTAAAAGATGGTCTGAGTGCTGTGCATGTTCCTTACGCATATGGATTTGCTATAATATTGCTCACTGTTATTGTTAAAGTTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTTGCTATGCAAAATCTTCAACCAAAAATTAAGGCTATCCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTCGAGACATCAAGGCTATACAAGCAAGCTGGTGTCAATCCATTGGCTGGTTGTTTGCCGACTTTGGCTACAATTCCTGTCTGGATAGGTCTCTACCAAGCCTTATCAAATGTGGCAAATGAAGGACTTTTGACCGAAGGATTTTTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCCGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGTCATCCACCACTGGGCTGGCACGACACTGCAGCATATCTTGTTTTACCCGTCCTTCTTGTTGCTTCTCAATATGTTTCTATGGAAATAATGAAACCCCCCCAGACTGATGATCCAGCCCAGAAAAATACACTTCTTGTTTTCAAGTTTCTTCCACTCATGATTGGTTATTTCTCGCTGTCTGTCCCTTCAGGGCTATCAATTTACTGGTTTACAAACAATGTTTTAAGCACAGCACAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCAAGTGGAATTATTACAGCAGGACGTGCTAAACGATCAGTTTCTCAGCCAGAAAGAGCCGGTGAGAGGTTTAAACAATTAAAGGAAAAGGAGAAAAAGAAGTTAAACAAGGCACTGCCTCAAGAAGAGGCTCAACCTCTGGCTTCTGTTTTGGAGTCTGATGGCGGTTCGGATGAAGAGAGTGATGACAAGGGTGACGAAGTTGCAGAAGAAGCATATGCTTCGACAGTGAACAAGGAGGTTCCAAACTTGAAGGAAAGAAGAAGCAAGCGCTCAAAGCGGAAGCGGGCTGTATAA 1359 0.4481 MAKTLISSPSFIGTPLPSVSRLGLHSFPLPHRKLVSTRVRFSLHEIPPIHSLTDSFDFSQIVTRAEALLYTLADAAVSADSGAGAAASTSTDAAAQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLVASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSVSQPERAGERFKQLKEKEKKKLNKALPQEEAQPLASVLESDGGSDEESDDKGDEVAEEAYASTVNKEVPNLKERRSKRSKRKRAV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00176 452 PANTHER OXA1 72 388 IPR001708 GO:0016020|GO:0032977
Accr13g00176 452 MobiDBLite consensus disorder prediction 384 452 - -
Accr13g00176 452 CDD 5TM_YidC_Alb3 130 343 IPR047196 -
Accr13g00176 452 Coils Coil 379 399 - -
Accr13g00176 452 Pfam 60Kd inner membrane protein 129 343 IPR028055 -
Accr13g00176 452 NCBIfam membrane protein insertase YidC 129 342 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00176 Accr-Chr13 1580013 1584485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00176 29 396 Chloroplast and Mitochondria Gene Families AT2G28800 73.404 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00176 K03217 - pvy:116126652 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00176 13 1580013 1584485 Accr13g00176 13 1580013 1584485 ECH