Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00170 672 MobiDBLite consensus disorder prediction 238 264 - -
Accr13g00170 672 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 524 566 IPR000225 GO:0005515
Accr13g00170 672 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 401 443 IPR000225 GO:0005515
Accr13g00170 672 FunFam RING-type E3 ubiquitin transferase 10 123 - -
Accr13g00170 672 CDD RING-Ubox_PUB 264 316 IPR045210 -
Accr13g00170 672 MobiDBLite consensus disorder prediction 335 356 - -
Accr13g00170 672 SUPERFAMILY ARM repeat 361 646 IPR016024 -
Accr13g00170 672 Coils Coil 624 658 - -
Accr13g00170 672 PANTHER U BOX DOMAIN-CONTAINING 35 636 - -
Accr13g00170 672 MobiDBLite consensus disorder prediction 340 356 - -
Accr13g00170 672 Gene3D - 347 662 IPR011989 -
Accr13g00170 672 Pfam Armadillo/beta-catenin-like repeat 390 429 IPR000225 GO:0005515
Accr13g00170 672 Pfam Armadillo/beta-catenin-like repeat 473 511 IPR000225 GO:0005515
Accr13g00170 672 FunFam RING-type E3 ubiquitin transferase 263 336 - -
Accr13g00170 672 ProSiteProfiles U-box domain profile. 262 336 IPR003613 GO:0004842|GO:0016567
Accr13g00170 672 SMART arm_5 554 594 IPR000225 GO:0005515
Accr13g00170 672 SMART arm_5 390 430 IPR000225 GO:0005515
Accr13g00170 672 SMART arm_5 472 512 IPR000225 GO:0005515
Accr13g00170 672 SMART arm_5 431 471 IPR000225 GO:0005515
Accr13g00170 672 SMART arm_5 596 636 IPR000225 GO:0005515
Accr13g00170 672 SMART arm_5 513 553 IPR000225 GO:0005515
Accr13g00170 672 Gene3D - 9 123 IPR036537 GO:0007166
Accr13g00170 672 SUPERFAMILY RING/U-box 253 339 - -
Accr13g00170 672 Pfam U-box domain 263 333 IPR003613 GO:0004842|GO:0016567
Accr13g00170 672 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 336 IPR013083 -
Accr13g00170 672 MobiDBLite consensus disorder prediction 242 260 - -
Accr13g00170 672 FunFam RING-type E3 ubiquitin transferase 346 497 - -
Accr13g00170 672 SMART Ubox_2 266 329 IPR003613 GO:0004842|GO:0016567
Accr13g00170 672 FunFam RING-type E3 ubiquitin transferase 537 655 - -
Accr13g00170 672 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 442 484 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00170 Accr-Chr13 1513658 1517752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00170 6 643 U-box Gene Family AT3G46510 72.457 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00170 - - pvy:116146246 1011.52