Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00164 ATGGGCAGTTGTTTGGGAACCCAAATTAAAGCTGAGAGCCAGTGTAACGCAGCGCCGAATTCCAAATACGTGAACACAGATGGATGTGATCTGAGCAGCTCCGGAAGTGATGTCTCAAAGGCCTCAGCGACTCATACTCGCCGTCGCCGGAGTGAGGGTGAAATCTTGCAGTCATCCAATTTGAAGAGCTTTTCTTATGCAGAACTGAAAGCGGCCACACGAAATTTCCGACACGATAGTGTTTTAGGAGAAGGTGGTTTTGGTTCAGTTTTCAAAGGATGGATTGATGAGCAATCCCTTACTGCTACGAAGCCAGGCACTGGCATTGTTATTGCTGTGAAAAAACTTAAGCAAGATAGCTTGCAAGGTCACGATGAGTGGTTGGCTGAAGTGAATTTTCTGGGACAATTTTGTCATCCCCATCTTGTAAAGTTAATCGGGTATTGCCTTGAAGACGAACACCGTCTTCTGGTGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTATTCAGGAGGGGCTCTTATTTCCAACCTCTCTCTTGGAGCCACCGTCTGAAGGTTGCTCTTGGTGCTGCCAGAGGGCTTGCATTTCTTCACAGTGCGGAAACGAAAGTGATATATAGGGACTTGAAGACCTCAAATATCTTGCTTGACTCAAATTACAATCCAAAACTTTCTGATTTTGGACTGGCCAAGGATGGACCAGCAGAGGACAAAAGTCACGTCTCCACTAGAGTATTAGGAACCTATGGATATACAGCTCCCGAATATGTAGCCACCGGTCATCTGACTGCAAAGAGTGATGTATATAGTTTCGGAGTGGTACTAGTAGAAATCTTATCAGGCCGGCGAGCTATGGACAGGAGTCGACCATCAGGACAACGCAATTTGGTGGACTGGGCTAAGTCATATCTAGCAAACAAACGTAAACTTTCTGTTGTGCTGGATAATCGTCTTGAAGGTCAGTATACGATAGAGGAGGCTCACAAGACAGCAACACTGGCATTGCGATGCATTTCGATCGAACCCAAGTTGAGGCCGACCATGGACGAGGTTGTTTCTGCATTGGAGCAGCTTCAAGTTCCCAATGTAAATGGAGGCAAACCAAAACCCTCTGTGAATAGATCCAGTCGCAGAAAAAGTGAAGGTGGCGTTAAGAATGAGAAGACCTCCACAGCTTATCCCCGTCCATCTGCTTCCGCTCTCTATGCTTGA 1221 0.4636 MGSCLGTQIKAESQCNAAPNSKYVNTDGCDLSSSGSDVSKASATHTRRRRSEGEILQSSNLKSFSYAELKAATRNFRHDSVLGEGGFGSVFKGWIDEQSLTATKPGTGIVIAVKKLKQDSLQGHDEWLAEVNFLGQFCHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSHRLKVALGAARGLAFLHSAETKVIYRDLKTSNILLDSNYNPKLSDFGLAKDGPAEDKSHVSTRVLGTYGYTAPEYVATGHLTAKSDVYSFGVVLVEILSGRRAMDRSRPSGQRNLVDWAKSYLANKRKLSVVLDNRLEGQYTIEEAHKTATLALRCISIEPKLRPTMDEVVSALEQLQVPNVNGGKPKPSVNRSSRRKSEGGVKNEKTSTAYPRPSASALYA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00164 406 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00164 406 Pfam Protein tyrosine and serine/threonine kinase 79 358 IPR001245 GO:0004672|GO:0006468
Accr13g00164 406 MobiDBLite consensus disorder prediction 30 52 - -
Accr13g00164 406 SUPERFAMILY Protein kinase-like (PK-like) 48 358 IPR011009 -
Accr13g00164 406 Gene3D Phosphorylase Kinase; domain 1 50 161 - -
Accr13g00164 406 ProSitePatterns Protein kinases ATP-binding region signature. 82 115 IPR017441 GO:0005524
Accr13g00164 406 Gene3D Transferase(Phosphotransferase) domain 1 162 370 - -
Accr13g00164 406 PANTHER OS01G0588500 PROTEIN-RELATED 42 362 - -
Accr13g00164 406 SMART serkin_6 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00164 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Accr13g00164 406 FunFam Probable serine/threonine-protein kinase PBL8 162 377 - -
Accr13g00164 406 FunFam Serine/threonine-protein kinase BIK1 42 161 - -
Accr13g00164 406 CDD STKc_IRAK 82 361 - -
Accr13g00164 406 MobiDBLite consensus disorder prediction 362 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00164 Accr-Chr13 1440370 1442342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00164 28 358 Glycoside Hydrolase AT3G07070 46.084 7.44e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr13g00164 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00164 - - gmx:100798404 594.734