Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00156 ATGGATCTTCACTTTGATGGAAGTCAACGTTCTAGAAATGGTCATAAACTTGATGATGGCGCCGCCAGCTCCGATTCAAATTATTTCCCTCATCCAGCCAACGATTGGGAACTCGACGAAAACTATTGGAAACTTCTTAATCTCACAACCGATCCGTTGTATCAACCTTATGCGGCTTCAGTTAATTTTTCCCTGCATGGTAGCGTGAAATATGAAGAATCAGAGCGGTTAGTTTCATCCTCCACTATAAACCCTGTAGGAGGCATGTCAGATGTGGAAGCTGTGTCTGAAACTTCGCCTCCAGATACTTCGCTGGAGGACGCTGACTTTTCAGAAACTATCAAGTACATAAGCCAAATGCTTATGGAAGAGAACTTTGAACAGAAACCAAGCATGTTTTATGATCCTCTGAGTCTACAAGTGACGGAGAAATCATTCTACGACGCTCTCAGAAAATATCATCCTCTTTCCCCCAATCAGCATTCCCAAGACATTCATCGGAATCTTGATAGCGCAGATGATAACCGTTGTGGGAGTAGTATTGACAGTAGCAGCATCAACAAGTCTCATGGTGCTAATACGCCCTATTTCTATGATACTCCATTTTCTGGTGATTATGCGTCCAAGTTAAATTTTCAACCCATCTCTGAGAAACCCTCTCAACCTCCGAGTGCTTATACTTACATCAGCAAGGGATTGTCGGATGCGGATTCCTCTTTTACTAGCAACTTGGCTCCAAATATCTTTACTGATGCAGAATCTGTTTCACAATTTGAAAGGGGATTGGAAGAAGCTAGCAAGTTTCTTCCCAGAGGACTTCAACTTGTCACTGATCGGGAGAGCAACGATATGGTTCCAGAGTCAATGGGATCGGCTGAAAAGGCAGTGGGAAATATTCGGGAGAATTCACATGGATTAAAGGGTTGGAAGAATCATGAACGTGAAGCTAGTGATACAGAAGAAGGGAGAAGTAAGAAGCAGTCGGCAGTGTATGCGGACGAGAGTGAGCTATCAGATATGTTTGATAAGGTGTTGCTTAGTGTTGAGAGTGTTCCATTAGGTGAGGAACACAACACATGGTCTCAGAATGGAAAAGACAAGGCCAATGAGCCAAGTGAACAGCCAAATTCATCAAATGGGGCGAAGACCCGCGGCAGGAGACAAGGCAGGAAGAAGGAAACCGTGGACTTGAGGACTCTTATGGCTCTATGTGCGCAAGCTGTGTCTGCATGTGACAGCGGAAGTGCCAATGAACTACTAAAGCAGATTAGGCAGCATTCTTCCCCAATCGGTGATGCATCACAGAGGCTGGCTCATTACTTTACCAATGGCCTTGAGGCACGCTTGTCTGGCTGTGGTACTGGAACCCAAATATTCTATGGCTCTCTAAGCTCCAAGAGGATATCTGCTTCTCAAATCTTGAGAGCTTACAAAGTTCTAATATCTGTCTGCCCCTTCAGGAGGTTTTCATGTTTTTTGGCAAATAAGACGATTTTTCACGCAGCTGAAAAGACAGAAACTGTTCATATTGTCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTTCTTTCGCAAAGACCTGGTGGGCCTCCGAAGCTACGCATTACAGGGATAGAATTGCCCCAGGCAGGGTTTCGTCCAGCAGAATTAATTGAGGAGACCGGTCGACGTCTATCTAATTATTGCAAACGTTTTAATGTTCCGTTTGAATACACAGCCATAGCATCACAAAACTGGGAAACCATCCCGTTAAAGGACTTTAAGACCGAGAGAAACGAATTTCTTGCGGTGAACTGTCTGCAGAGATTTAAGAATTTACTGGACGAGACGATTGAAGTGAAGAGTCCTAGAGATGCAGTTTTCAACTTGATCAGAAAGATGAATCCGGATATATTTGTTCAATCCATTGTGAATGGATCCTACAATGCCCCTTTCTTTGCGTCACGGTTCAAAGAGGCAATGTTCCATTATTCTGCAATATATGATATGTTTGACACTGTCATACCTCGTGAAAATGAATGGAGGCTGATGATTGAGAGAGAGTTGTGGGGTCGGGAGATCATGAATGTGGTTGCGTGTGAAGGGATCGAGAGGGTTGAGAGGCCTGAGTCATACAAACACTGGCAAGTGAGGGGGAGGAGGGCTGGTTTCAAGCAGCTGCCACTGCCAAAGGAACTAATGGTCACATTCAGCGAAAAGTTGAAGGCATGGTATCACAGGGATTTTGTAATGGATGAAGACAACAACTGGATGCTGCAGGGCTGGAAGGGCCGCATCATTTGTGCTTCCACATGTTGGGTGCCTTCATAA 2325 0.4443 MDLHFDGSQRSRNGHKLDDGAASSDSNYFPHPANDWELDENYWKLLNLTTDPLYQPYAASVNFSLHGSVKYEESERLVSSSTINPVGGMSDVEAVSETSPPDTSLEDADFSETIKYISQMLMEENFEQKPSMFYDPLSLQVTEKSFYDALRKYHPLSPNQHSQDIHRNLDSADDNRCGSSIDSSSINKSHGANTPYFYDTPFSGDYASKLNFQPISEKPSQPPSAYTYISKGLSDADSSFTSNLAPNIFTDAESVSQFERGLEEASKFLPRGLQLVTDRESNDMVPESMGSAEKAVGNIRENSHGLKGWKNHEREASDTEEGRSKKQSAVYADESELSDMFDKVLLSVESVPLGEEHNTWSQNGKDKANEPSEQPNSSNGAKTRGRRQGRKKETVDLRTLMALCAQAVSACDSGSANELLKQIRQHSSPIGDASQRLAHYFTNGLEARLSGCGTGTQIFYGSLSSKRISASQILRAYKVLISVCPFRRFSCFLANKTIFHAAEKTETVHIVDFGIQYGFQWPILIKFLSQRPGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFNVPFEYTAIASQNWETIPLKDFKTERNEFLAVNCLQRFKNLLDETIEVKSPRDAVFNLIRKMNPDIFVQSIVNGSYNAPFFASRFKEAMFHYSAIYDMFDTVIPRENEWRLMIERELWGREIMNVVACEGIERVERPESYKHWQVRGRRAGFKQLPLPKELMVTFSEKLKAWYHRDFVMDEDNNWMLQGWKGRIICASTCWVPS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00156 774 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 327 761 IPR005202 -
Accr13g00156 774 MobiDBLite consensus disorder prediction 82 106 - -
Accr13g00156 774 ProSiteProfiles GRAS family profile. 388 772 IPR005202 -
Accr13g00156 774 MobiDBLite consensus disorder prediction 355 392 - -
Accr13g00156 774 Pfam GRAS domain family 398 771 IPR005202 -
Accr13g00156 774 MobiDBLite consensus disorder prediction 355 383 - -
Accr13g00156 774 MobiDBLite consensus disorder prediction 291 333 - -
Accr13g00156 774 MobiDBLite consensus disorder prediction 1 28 - -
Accr13g00156 774 MobiDBLite consensus disorder prediction 305 333 - -
Accr13g00156 774 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00156 Accr-Chr13 1366289 1368613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00156 113 774 GRAS Transcription Factor Family AT1G07530 49.145 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr13g00156 GRAS 1.6e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00156 - - pcin:129314564 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00156 13 1366289 1368613 Accr1g03546 1 71912187 71914160 CCT
Accr13g00156 13 1366289 1368613 Accr13g00156 13 1366289 1368613 ECH