Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00136 ATGGAGTCTAAAGATAAGGCAACATCCTCGTCAGAAACAAAGCAAAGTGATGAGCAAGGAGCAAGTCATCAAGTGACAAGGTCGTACGAGTGTAGCTTCTGTAAAAGGGGTTTCTCTAATGCACAAGCATTGGGAGGACACATGAACATTCACAGGAAAGACAAAGCCAAACTGAAGCAATCTTCCGACCGAGCTCGTAGTCATCGTCGTTATCATCAGCCTGAATCTTTCGATGTTCACAGTAAGGTCGAAGCAGACAGAACCGAAGAGAACGAAACCTCCAAACTTCATATAAAGCAGCTTCCTTTATTTGCAGAAACACCTAGTGGCGAAACACAAAAGCCAGAAGAATTAGGTCATGTTCATGATAGAGGAATTATTTCTGAAGAAATCAAGGGGTCATCGTCATCGGATTTAGACCTTGAACTCAGACTAGGACCTGACCCACCCTCTCCCGCTACTGGTACCAGAAATTTTTTTTGA 483 0.4348 MESKDKATSSSETKQSDEQGASHQVTRSYECSFCKRGFSNAQALGGHMNIHRKDKAKLKQSSDRARSHRRYHQPESFDVHSKVEADRTEENETSKLHIKQLPLFAETPSGETQKPEELGHVHDRGIISEEIKGSSSSDLDLELRLGPDPPSPATGTRNFF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00136 160 MobiDBLite consensus disorder prediction 1 26 - -
Accr13g00136 160 MobiDBLite consensus disorder prediction 130 160 - -
Accr13g00136 160 Pfam C2H2-type zinc finger 29 53 - -
Accr13g00136 160 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Accr13g00136 160 SMART c2h2final6 29 51 IPR013087 -
Accr13g00136 160 SUPERFAMILY beta-beta-alpha zinc fingers 27 56 IPR036236 -
Accr13g00136 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Accr13g00136 160 MobiDBLite consensus disorder prediction 48 94 - -
Accr13g00136 160 Gene3D Classic Zinc Finger 3 100 - -
Accr13g00136 160 PANTHER OS07G0101800 PROTEIN 1 149 - -
Accr13g00136 160 MobiDBLite consensus disorder prediction 102 121 - -
Accr13g00136 160 MobiDBLite consensus disorder prediction 45 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00136 Accr-Chr13 1251248 1251730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00136 27 156 C2H2 Transcription Factor Family AT3G53820 39.706 1.95e-21 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr13g00136 zf-C2H2_6 7.1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00136 - - pcin:129313190 180.644