Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00128 ATGGCCAGTTTGTTGAAGCAAATGGAACATGAAAAAACTCCTATCCTAGAAGCAAGTTCCATTCAGGAAATAGAGATGCTAGCTGCCTCCGAAAGAATTGATATTCTTCCTGGGGCAACAGAGTCATCTTGCAGTTCTGTTTGCCCTTTTTCCAGGCGAGAACACAGTCTTCTGGCATCAGAAGAGTCATCAAAGTCGGCAAAGAAACTTTGTGGACTCATAGTTTTCTATGCAATGGTCATGCTTGTGGAGGTTGGTGGTGGTTTGAAAGCCAACAGCCTAGCTGTTATGAGTGATGCTGCGCATTTGCTTTCAGATATTGCCGGATTCACTATCTCTCTCTTTGCAGTATACGCATCAGGCTGGGAGGCAACTCCAGATCAGTCTTTTGGATACAACAGGCTTGAGGTTCTGGGTGCTCTTTTATCTGTGCAGTTAATTTGGCTAATATCTGGCTTTTTAATATATGAAGCACTTGGGAGACTTCTTTACAGAAAGGCCAAGGTGAATGGCATTCTTATGTTTTCAATTGCAGCTTTTGGGTTTGTTCTTAACTTAATTATGGTCTTATGGCTTGGCCATGATCACAGTCACCATCACCATGGCTGTGGACACGCTAATCATGATCATGGAAAGGAGGAGGAGCATAATAACACAACAGATGATGAGGAGCTTAGTCTAGTTTCGAGTAGTCCTAGAAAAAGAAATGCACTGAACATAAATTTGCAGGGTGCCTATCTGCATGTCATTGCCGATCTGATTCAATCTGTTGGGGTGATGATTGGTGGAGCTGTGATATGGGCTAAACCAGAATGGTTAGTGGTTGACCTGTTGTGTACTCTAATATTTTGTTTTATATCCCTGGGAACTACAGTGTCAACGCTCAATAATGTTTTTGGCATTTTGATGGAGAAGACACCAAGTGAGATCGATATCGTGAAGCTGGAAAATGGCCTTAAGGGTATGAAGGGAGTGCGAGATATCCACGACTTGCACATTTGGGCCATAACCGTAGGGAAAAATGTTCTTTCTTGTCATGTAATAGCCGAGCCTGGGGTCAGTTCCCCTGATTTGCTCAACAGGATTAGGCATTACTGTGAAAAAGCACACAAAATTCATCATGTAACCATACAAATTGAATAA 1143 0.4243 MASLLKQMEHEKTPILEASSIQEIEMLAASERIDILPGATESSCSSVCPFSRREHSLLASEESSKSAKKLCGLIVFYAMVMLVEVGGGLKANSLAVMSDAAHLLSDIAGFTISLFAVYASGWEATPDQSFGYNRLEVLGALLSVQLIWLISGFLIYEALGRLLYRKAKVNGILMFSIAAFGFVLNLIMVLWLGHDHSHHHHGCGHANHDHGKEEEHNNTTDDEELSLVSSSPRKRNALNINLQGAYLHVIADLIQSVGVMIGGAVIWAKPEWLVVDLLCTLIFCFISLGTTVSTLNNVFGILMEKTPSEIDIVKLENGLKGMKGVRDIHDLHIWAITVGKNVLSCHVIAEPGVSSPDLLNRIRHYCEKAHKIHHVTIQIE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00128 380 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 42 380 - -
Accr13g00128 380 MobiDBLite consensus disorder prediction 206 222 - -
Accr13g00128 380 Pfam Cation efflux family 74 303 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Accr13g00128 380 Gene3D Cation efflux protein transmembrane domain 66 302 IPR027469 -
Accr13g00128 380 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 304 IPR027469 -
Accr13g00128 380 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 307 380 IPR036837 -
Accr13g00128 380 MobiDBLite consensus disorder prediction 202 226 - -
Accr13g00128 380 NCBIfam cation diffusion facilitator family transporter 68 380 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00128 Accr-Chr13 1198988 1200130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00128 8 380 Inorganic Solute Cotransporters AT2G29410 49.606 1.34e-122 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00128 K14689 - gmx:100777590 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00128 13 1198988 1200130 Accr13g00128 13 1198988 1200130 ECH