Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00110 ATGAGGAAGCCCGAATCTGGGAAAAACAACAACAACAATAACAAGCTCAGGAAGGGGCTGTGGTCACCGGAAGAAGATGACAAGCTAATGAACTACATGCTAAACAATGGACAAGGTTGTTGGAGTGATGTGGCCAGGAATGCTGGCTTGCAACGATGTGGCAAAAGTTGTCGCCTTCGTTGGATCAATTACTTGAGGCCTGATCTTAAGCGTGGCGCTTTCTGTCCCCAGGAAGAAGAACTTATCATCCATCTTCATTCCCTTCTCGGCAACAGATGGTCCCAAATAGCGGCGCGCTTGCCCGGGCGAACCGACAACGAAATCAAGAATTTCTGGAACTCCACAATAAAGAAAAGGCTCAAGCTCATGTCATCATCCACCACCCCAACCTCACAAAATGCAAGCGAGTCTTCTTCCTTGTTATCTGAGCATAATATTAAAGACCTCAATAATGTCATGGGAGGTTTCATGCCTATGTTCCACAACAACCTAATTGAGAGATTGCCTTTGCTTGAGCATGGACTGAACGCGCAAGCATCTTCAGACGGATCATTCTTCAACACTAATAATGGAGGGCCTTGCTTCACACAAAATGGTATTCACCACAACAATATTAATAATGGTTTTTATGTAGAAAATGGAGTTTTTGGGATTGGGAGTGTAAATATTGGAGCAGAAGGGGAGTTGTTTGTGCCTCCTCTAGAGAGTTTTAACACTATAACTGATAACCTGCAGAATAGGGACACTAACGTTAATAGTAACTTGGATAACATAAACAGCATCGTTAACAACTGCAACAATATTAGCAGCAACAATAATAATAATAATAGAGCTGAGAATAGAGGTGGCGTGATGGAGAATCTTTTTCAGGAAGAGTTAACTTTGGGAGAGTGGGACTTAGAGGACTTGATGAAAGATGTTTCATCCTTTCCCAGCTTTCTTGATTTCTCAAGCTGA 957 0.4253 MRKPESGKNNNNNNKLRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFCPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKLMSSSTTPTSQNASESSSLLSEHNIKDLNNVMGGFMPMFHNNLIERLPLLEHGLNAQASSDGSFFNTNNGGPCFTQNGIHHNNINNGFYVENGVFGIGSVNIGAEGELFVPPLESFNTITDNLQNRDTNVNSNLDNINSIVNNCNNISSNNNNNNRAENRGGVMENLFQEELTLGEWDLEDLMKDVSSFPSFLDFSS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00110 318 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Accr13g00110 318 Gene3D - 15 71 - -
Accr13g00110 318 PANTHER MYB DOMAIN PROTEIN 55 10 274 - -
Accr13g00110 318 FunFam MYB transcription factor 15 71 - -
Accr13g00110 318 MobiDBLite consensus disorder prediction 1 20 - -
Accr13g00110 318 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Accr13g00110 318 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Accr13g00110 318 SMART sant 17 67 IPR001005 -
Accr13g00110 318 SMART sant 70 118 IPR001005 -
Accr13g00110 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Accr13g00110 318 FunFam Transcription factor MYB46 72 145 - -
Accr13g00110 318 CDD SANT 21 65 IPR001005 -
Accr13g00110 318 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Accr13g00110 318 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Accr13g00110 318 Gene3D - 72 145 - -
Accr13g00110 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Accr13g00110 318 CDD SANT 76 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00110 Accr-Chr13 1060944 1062819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00110 1 313 MYB Transcription Factor Family AT5G12870 47.664 5.05e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr13g00110 Myb_DNA-binding 3.7e-12 CL0123