Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00104 ATGGAATCTTTAACTCCTCCACCCTGGCCGGAGCTCCACCTCAACAACCTCAGGGCGCTCAAAGTCCTCGGTAAGGGTGGCATGGGCACCGTCTTCCTCGTCCACGACATCTCAACCGATCCCTCCGCCCGCTCCCCCTTCGCTCTCAAGGTCCTCGACAAATCCTCCATTAATTCCCACCACACCACCCTCGACGCCGACCGCCGTGCCCGCTGGGAAATCCAGGTCCTCACCCTTTTGTCCCACCCCTTCCTCCCTTCCCTCCTCGGAACCGTCGAGTCCGACCAGCTTCTTGGTTGGGCCGTTCCTTATTGCCCTGGTGGTGATCTTCACCGTCTCCTTCACCGCCAAGTTGATCGGGTTTTCTCCCCCGCCATCATTCGCTTCTATTTGGCAGAGATCCTGTGCGCCCTCGACCATCTTCACGGCATTGGTGTCGCCTACCGAGATTTGAAGCCCGAGAACGTCCTCATTCAGCAGTCCGGCCACGTCACTCTCACCGACTTCGATCTCTCTCACAAGCTCAACCCCAAATCCATCAGAACGGTCATTTCGTCAACGCAAGCTCAAGACAATTTCCCCGAAATCCGCCGGAAAAATCGCCGGAACTTGAGGCGATGGTTCCCCGCCGCACCGGAGAACAAGAAGGGGCTGAAGAAGGCGAAGTCATCCCGAGTCAGTCCGGTCAGTCGACGGAAGCTGAGTTTCTCAAGTGGTGAGAAGTCTAACTCGTTTGTGGGCACGGAAGAGTACGTATCGCCGGAGGTAGTGCGCGGCGACGGTCACGAGTTTGCCGTTGATTGGTGGGCCCTGGGAATATTAGCTTACGAACTGTCATACGGTACGACCCCGTTCAAGGGAAGTAACCGGAAGGAAACTTTTCGGAACGTTCTGTTGAAAACACCGGAATTCATAGGAAAGCGGTCGGTCCTAACGGATTTGATTGAGCGGTTGCTGGAGAAGGATCCCACAAAGCGGTTGGGATACGTGCGAGGCGCGTGCGAGATTAGGGAGCACGAATTCTTCAGAGGGGTACAATGGGACCTACTGATGGAGGTAGTGAGGCCGCCGTTCATTCCGCCTAGAGAGGACAGCGTCGACTTGACGGCCAGCGCTATGGACATAACAGATTACTTCCGCAGCCTGAATTCGCCGCCGTCGTTCCCTGCATCGCCGTCTTCTGAGTATCAGAGGAATATCTCATACGGAGAATTTTGA 1218 0.5591 MESLTPPPWPELHLNNLRALKVLGKGGMGTVFLVHDISTDPSARSPFALKVLDKSSINSHHTTLDADRRARWEIQVLTLLSHPFLPSLLGTVESDQLLGWAVPYCPGGDLHRLLHRQVDRVFSPAIIRFYLAEILCALDHLHGIGVAYRDLKPENVLIQQSGHVTLTDFDLSHKLNPKSIRTVISSTQAQDNFPEIRRKNRRNLRRWFPAAPENKKGLKKAKSSRVSPVSRRKLSFSSGEKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYELSYGTTPFKGSNRKETFRNVLLKTPEFIGKRSVLTDLIERLLEKDPTKRLGYVRGACEIREHEFFRGVQWDLLMEVVRPPFIPPREDSVDLTASAMDITDYFRSLNSPPSFPASPSSEYQRNISYGEF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00104 405 Pfam Protein kinase domain 237 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00104 405 Pfam Protein kinase domain 20 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00104 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Accr13g00104 405 Gene3D Phosphorylase Kinase; domain 1 362 372 - -
Accr13g00104 405 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Accr13g00104 405 FunFam Serine/threonine-protein kinase OXI1 240 361 - -
Accr13g00104 405 MobiDBLite consensus disorder prediction 385 405 - -
Accr13g00104 405 SUPERFAMILY Protein kinase-like (PK-like) 14 394 IPR011009 -
Accr13g00104 405 ProSiteProfiles AGC-kinase C-terminal domain profile. 343 405 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr13g00104 405 Gene3D Transferase(Phosphotransferase) domain 1 239 361 - -
Accr13g00104 405 FunFam Serine/threonine-protein kinase OXI1 109 177 - -
Accr13g00104 405 MobiDBLite consensus disorder prediction 214 233 - -
Accr13g00104 405 Gene3D Transferase(Phosphotransferase) domain 1 109 180 - -
Accr13g00104 405 ProSiteProfiles Protein kinase domain profile. 17 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00104 405 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Accr13g00104 405 SMART serkin_6 17 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00104 405 PANTHER FLIPPASE KINASE 1-RELATED 12 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00104 Accr-Chr13 936311 937528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00104 12 405 AGC Kinase Gene Family AT3G20830 58.231 2.87e-155 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr13g00104 Pkinase 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00104 - K08286 qsa:O6P43_028132 573.163