Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00103 ATGCCGGCTTTTTGTCAGTCGACCACACACATGGAATCTTTAACTCCTCCACCCTGGCCGGAGCTCCACCTCAACAACCTCAGGGCGCTCAAAGTCCTCGGTAAGGGTGGCATGGGCACCGTCTTCCTCGTCCACGACATCTCAACCGATCCCTCCGCCCGCTCCCCCTTCGCTCTCAAGGTCCTCGACAAATCCTCCATTAATTCCCACCACACCACCCTCGACGCCGACCGCCGTGCCCGCTGGGAAATCCAGGTCCTCACCCTTTTGTCCCACCCCTTCCTCCCTTCCCTCCTCGGAACCGTCGAGTCCGACCAGCTTCTTGGTTGGGCCGTTCCTTATTGCCCTGGTGGTGATCTTCACCGTCTCCTTCACCGCCAAGTTGATCGGGTTTTCTCCCCCGCCATCATTCGCTTCTATTTGGCAGAGATCCTGTGCGCCCTCGACCATCTTCACGGCATTGGTGTCGCCTACCGAGATTTGAAGCCCGAGAACGTCCTCATTCAGCAGTCCGGCCACGTCACTCTCACCGACTTCGATCTCTCTCACAAGCTCAACCCCAAATCCATCAGAACGGTCATTTCGTCAACGCAAGCTCAAGACAATTTCCCCGAAATCCGCCGGAAAAATCGCCGGAACTTGAGGCGATGGTTCCCCGCCGCACCGGAGAACAAGAAGGGGCTGAAGAAGGCGAAGTCATCCCGAGTCAGTCCGGTCAGTCGACGGAAGCTGAGTTTCTCAAGTGGTGAGAAGTCTAACTCGTTTGTGGGCACGGAAGAGTACGTATCGCCGGAGGTAGTGCGCGGCGACGGTCACGAGTTTGCCGTTGATTGGTGGGCCCTGGGAATATTAGCTTACGAACTGTCATACGGTACGACCCCGTTCAAGGGAAGTAACCGGAAGGAAACTTTTCGGAACGTTCTGTTGAAAACACCGGAATTCATAGGAAAGCGGTCGGTCCTAACGGATTTGATTGAGCGGTTGCTGGAGAAGGATCCCACAAAGCGGTTGGGATACGTGCGAGGCGCGTGCGAGATTAGGGAGCACGAATTCTTCAGAGGGGTACAATGGGACCTACTGATGGAGGTAGTGAGGCCGCCGTTCATTCCGCCTAGAGAGGACAGCGTCGACTTGACGGCCAGCGCTATGGACATAACAGATTACTTCCGCAGCCTGAATTCGCCGCCGTCGTTCCCTGCATCGCCGTCTTCTGAGTATCAGAGGAATATCTCATACGGAGAATTTTGA 1248 0.5585 MPAFCQSTTHMESLTPPPWPELHLNNLRALKVLGKGGMGTVFLVHDISTDPSARSPFALKVLDKSSINSHHTTLDADRRARWEIQVLTLLSHPFLPSLLGTVESDQLLGWAVPYCPGGDLHRLLHRQVDRVFSPAIIRFYLAEILCALDHLHGIGVAYRDLKPENVLIQQSGHVTLTDFDLSHKLNPKSIRTVISSTQAQDNFPEIRRKNRRNLRRWFPAAPENKKGLKKAKSSRVSPVSRRKLSFSSGEKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYELSYGTTPFKGSNRKETFRNVLLKTPEFIGKRSVLTDLIERLLEKDPTKRLGYVRGACEIREHEFFRGVQWDLLMEVVRPPFIPPREDSVDLTASAMDITDYFRSLNSPPSFPASPSSEYQRNISYGEF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00103 415 FunFam Serine/threonine-protein kinase OXI1 119 187 - -
Accr13g00103 415 SUPERFAMILY Protein kinase-like (PK-like) 24 404 IPR011009 -
Accr13g00103 415 Gene3D Phosphorylase Kinase; domain 1 27 118 - -
Accr13g00103 415 Gene3D Phosphorylase Kinase; domain 1 372 382 - -
Accr13g00103 415 ProSitePatterns Protein kinases ATP-binding region signature. 33 60 IPR017441 GO:0005524
Accr13g00103 415 Pfam Protein kinase domain 247 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00103 415 Pfam Protein kinase domain 30 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00103 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Accr13g00103 415 Gene3D Transferase(Phosphotransferase) domain 1 249 371 - -
Accr13g00103 415 ProSiteProfiles Protein kinase domain profile. 27 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00103 415 MobiDBLite consensus disorder prediction 224 243 - -
Accr13g00103 415 FunFam Serine/threonine-protein kinase OXI1 250 371 - -
Accr13g00103 415 SMART serkin_6 27 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00103 415 Gene3D Transferase(Phosphotransferase) domain 1 119 190 - -
Accr13g00103 415 PANTHER FLIPPASE KINASE 1-RELATED 22 377 - -
Accr13g00103 415 ProSiteProfiles AGC-kinase C-terminal domain profile. 353 415 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00103 Accr-Chr13 936311 937558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00103 22 415 AGC Kinase Gene Family AT3G20830 58.231 2.28e-155 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr13g00103 Pkinase 1.2e-30 CL0016