Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00065 ATGGGATTCTCAGTAAGACATTTCTTGATCTGCTTCTTGAATGTGAACCCATGGCAACCTCGGATTTTCTTTGCCATTTCAGTTTTTTTGTCGTGTTCATGCTGGTCTGTTTCTGGTCTGGGTTCCATGTCTTCCATTGCCATCTCTTACGGGGAAAAAGGTTCTGTCTTTTGTGGTCTGAGATCAGATGGGTCTCATACTGTGAACTGTTACGGATCAAACTCAGCCATAGTCTATGGAATACCAACCCATTTCCCAATTCTGGGTCTAACCGCAGGTGATGGCTTTGTCTGTGGACTCCTAATGGATACTTTCCAACCTTATTGTTGGGGTAGCAGTGGCTATATCGAAATGGGTGTTCCTCAACCTATGACGGAAGGAGCAGAGTATCTAGAAATCAGTGCTGGGGATTACCATGTTTGTGGATTGAGGAAGCCCTTGACAGGAAGACAGAGAAATATTTCTCTTGTAGATTGTTGGGGTTACAACATGACCCAGAACTATGTTTTTGATGGTCAGATTCAATCTATCTCGGCAGGTTCTGAATTCAACTGTGGATTATTTTCCCAGAACAGAACAGTCTTCTGCTGGGGCGACGATACTAGTAGCAGAGTAATCGGTTTAGTTCCAAAAGACAAGAAGTTCCAGAAGATTTCTGCAGGCGGCTTTCATGTGTGTGGGATTTTAGAAGGGGTGAATTCCAGAACTATTTGTTGGGGAAGGAGTTTGGGAATTGAGGAAGAAATTGCAGTGAAAAGTTCTGGGCAAGGCAATGTTGATTTAGCTCCAAATGAACCTATGCTCTCTGTTGTGGGAGGAAGATTCCATGCTTGTGGCATCAAAACTTATGATCATGGTGTGATTTGCTGGGGTTTTACTATCAAGGGAAGTTCCCCACTTCCTAGTGGGATTAAGGTATTCGAGATTGCTGCTGGAAATTATTTTACTTGTGGAATACTTGCCCAGAAATCTCTTCTTCCTTCTTGTTGGGGTGTTGGATTCCCTACTTCTCTACCATTAGCTGCCTCTCCTGGAATATGCCAGCCCAATCCATGTCCTCCTGGTTTCTATGAAGTTCAACAGCAAAAGGGTCTTTGCAAGTCCTCGGATTCTCGCTTTTGCATGCCATGTAGTGGAGCTTGTCCTGCTGACATGTATCAGAAAAGTGAGTGCAATTATACATCTGACAGACAATGTGAATACAAATGTTCTAGTTGTTCGTCCCCTGAATGCTTCTCCAATTGCTCCTTTTCAGATTCCAATGCTAACACGGGAAAGAAAGTTGAGAAATTTTGGTCCTTGCAGTTGCCAGTGATAATTGCTGAGATTGCTTTTGCGGTCTTCTTTGTTAGTCTTGTGACCTTAACTTCTGTTTTATATGTTCGCTACAAGCTACGAAGTTGTAGGTGTTCTATGGAAGGATCAAACGTGAAGAAACTTCATGGCAATAACTCTTCCCTCCAAAAAGAGAACAGCAAGATCAGTCCAGACTTAGAGGAGCTCAAGATCAGGAGGGCTCAAACTTTTACCTATGAGGAACTTGAAAGAGCAACAGGTGGGTTCAAAGAAGAATCCATAGTTGGCAAAGGAAGCTTTTCGTGTGTATTCAAAGGAGTATTGAAAGATGGGACTGTTGTAGCAGTGAAAAGGGCCATAATGTCTCCCAACATGCAAAAGAATTCCAAAGAGTTTCATACAGAACTTGACTTACTTTCCAGGCTGAACCATGCCCATTTACTCAACCTGCTAGGGTACTGTGAAGAAGGTGGAGAGAGGCTTCTTGTTTATGAGTTCATGGCACATGGCTCCTTGCACCAACATCTCCATGGCAAAAACAAGGCCTCCAAAGAGCAGTTGGATTGGGTTAGAAGGGTAACAATTGCAGTACAAGCAGCCAGAGGAATTGAATATTTACATGGTTATGCCTGCCCACCTGTGATTCACAGAGACATCAAATCTTCAAACATCCTCATTGATGAAGAACACAATGCTAGAGTTTCTGATTTTGGCCTCTCATTACTGGGTCCTGCTGATAGTAGCTCCCCATTGGCTGAACTACCTGCCGGGACGCTTGGCTATCTTGATCCTGAATATTACAGACTTCATTACCTTACCACAAAATCTGATGTATATAGCTTTGGCGTGCTGCTCTTGGAAATTCTGAGTGGTAGAAAAGCCATTGACATGCAATACGAAGAAGGTAACATAGTTGAATGGGCCGTGCCTTTGATTAAGGCAGGAGATATCACTGCAATTTTAGACCCAGTTCTGAAACCTCCTTCTGATCTTGAAGCCTTGAAGAGAATTGCGAACGTGGCCTGTAAATGCGTGAGGATGAGAGGGAAAGAGAGGCCATCAATGGACAAAGTGACAACTGCTTTGGAACGGGCTCTTGCGCAACTAATGGGTAGCCCAAGCAACGAGCAGCCAATTTTGCCGACGGAGGTGGTGTTGGGAAGTAACAGATTACATAAGAAATCGTCTCAGAGATCTTCAAACAAGTCAACTTCAGAAACAGACGCAGGAGAAGCTGAGGATCAAGGGTTCGAGTTCAGAGCACCGTCGTGGATAACATTTCCGAGCGTTACTTCTTCTCAAAGAAGGAAGTCGTCGGTGTCAGAGGGGGATGTGGAGGGGAAAAATTCAGAAGCCAAGAACTTGGGAAACATGGGTGTTGGTGGTGGTGATGTTTTGAGGAGTCTAGAGGAAGAGATTGGACCTGCTTCTCCTCAAGAGAGACTGTTTTTGGAGCACAACTTCTGA 2763 0.4405 MGFSVRHFLICFLNVNPWQPRIFFAISVFLSCSCWSVSGLGSMSSIAISYGEKGSVFCGLRSDGSHTVNCYGSNSAIVYGIPTHFPILGLTAGDGFVCGLLMDTFQPYCWGSSGYIEMGVPQPMTEGAEYLEISAGDYHVCGLRKPLTGRQRNISLVDCWGYNMTQNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDDTSSRVIGLVPKDKKFQKISAGGFHVCGILEGVNSRTICWGRSLGIEEEIAVKSSGQGNVDLAPNEPMLSVVGGRFHACGIKTYDHGVICWGFTIKGSSPLPSGIKVFEIAAGNYFTCGILAQKSLLPSCWGVGFPTSLPLAASPGICQPNPCPPGFYEVQQQKGLCKSSDSRFCMPCSGACPADMYQKSECNYTSDRQCEYKCSSCSSPECFSNCSFSDSNANTGKKVEKFWSLQLPVIIAEIAFAVFFVSLVTLTSVLYVRYKLRSCRCSMEGSNVKKLHGNNSSLQKENSKISPDLEELKIRRAQTFTYEELERATGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNKASKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKAGDITAILDPVLKPPSDLEALKRIANVACKCVRMRGKERPSMDKVTTALERALAQLMGSPSNEQPILPTEVVLGSNRLHKKSSQRSSNKSTSETDAGEAEDQGFEFRAPSWITFPSVTSSQRRKSSVSEGDVEGKNSEAKNLGNMGVGGGDVLRSLEEEIGPASPQERLFLEHNF 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00065 920 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Accr13g00065 920 MobiDBLite consensus disorder prediction 820 895 - -
Accr13g00065 920 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 25 920 - -
Accr13g00065 920 MobiDBLite consensus disorder prediction 821 838 - -
Accr13g00065 920 Gene3D - 40 202 IPR009091 -
Accr13g00065 920 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Accr13g00065 920 Gene3D Transferase(Phosphotransferase) domain 1 599 809 - -
Accr13g00065 920 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 351 399 IPR001368 GO:0005515
Accr13g00065 920 FunFam Receptor protein kinase CRINKLY4 599 801 - -
Accr13g00065 920 SUPERFAMILY RCC1/BLIP-II 254 335 IPR009091 -
Accr13g00065 920 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Accr13g00065 920 SUPERFAMILY RCC1/BLIP-II 40 242 IPR009091 -
Accr13g00065 920 SMART serkin_6 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00065 920 ProSiteProfiles Protein kinase domain profile. 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00065 920 FunFam serine/threonine-protein kinase-like protein CCR1 491 598 - -
Accr13g00065 920 Gene3D Phosphorylase Kinase; domain 1 491 598 - -
Accr13g00065 920 SUPERFAMILY Protein kinase-like (PK-like) 500 794 IPR011009 -
Accr13g00065 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Accr13g00065 920 FunFam Serine/threonine-protein kinase-like protein CR4 39 206 - -
Accr13g00065 920 CDD STKc_IRAK 527 796 - -
Accr13g00065 920 Gene3D - 209 345 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00065 Accr-Chr13 613795 616557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00065 26 920 Receptor kinase-like Gene Family AT3G59420 69.324 0.0 1266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Accr13g00065 PK_Tyr_Ser-Thr 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00065 - - qsa:O6P43_028109 1535.01