Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00053 ATGAAAATCCAGTGCGATGTGTGTGAGAAAGCTCCGGCAACGGTGATTTGTTGCGCCGACGAGGCTGCTTTATGTGCTAAATGCGACATTGAAGTTCATGCTGCCAACAAGCTAGCCAGCAAGCACCAGAGGCTTCTCCTTCAGTGCCTCTCTACCAAGCTTCCCACTTGTGACATCTGCCAAGACAAGCCAGCTTTTATATTTTGTGTTGAAGACAGAGCACTGTTCTGTGAAGCTTGTGATGAACCGATTCATTCAGCTGGAAGCCTTTCTGCAAACCACCAGCGTTTCCTTGCAACTGGTATCCGTGTGGCTCTGAGTTCTAACTGCTCCAAGGACAATGAAGAACGCCGCTTGGAGCCACCAAATCGAAGTGCTCAACAAGCTTCTGCAAAGGTCCCTCCTCAGCCTCAGCAAGTCCCTACCTTCCCATCCTCTTGGGCTGTGGATGACTTGTTGGAATTCACTGACTTCGAATCACCTGACAAGAAGGAATCACTGGAGTTTGGAGAGCTAGAGTGGTTATCGGAGGTGGGCCTTTTCGGAGAACAATTTCCTGGGGAGGCATTGACTGCAGCTGAAGTTCCACAGCTTCCAGTAACACAAACTAGCAATGTTGCCTCGTACAGACCCGGATCCAAGTCCTTCATGTCTCTCAAAAAGCCCAGGATTGAATTTGAAGACGATGATGAGCACTTCACTGTGCCTGATCTTGGTTGA 720 0.4917 MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSTKLPTCDICQDKPAFIFCVEDRALFCEACDEPIHSAGSLSANHQRFLATGIRVALSSNCSKDNEERRLEPPNRSAQQASAKVPPQPQQVPTFPSSWAVDDLLEFTDFESPDKKESLEFGELEWLSEVGLFGEQFPGEALTAAEVPQLPVTQTSNVASYRPGSKSFMSLKKPRIEFEDDDEHFTVPDLG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00053 239 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Accr13g00053 239 CDD Bbox1_BBX-like 5 47 - -
Accr13g00053 239 MobiDBLite consensus disorder prediction 113 141 - -
Accr13g00053 239 SMART bboxneu5 4 47 IPR000315 GO:0008270
Accr13g00053 239 SMART bboxneu5 52 99 IPR000315 GO:0008270
Accr13g00053 239 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Accr13g00053 239 Gene3D Classic Zinc Finger 1 95 - -
Accr13g00053 239 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Accr13g00053 239 CDD Bbox1_BBX-like 57 98 - -
Accr13g00053 239 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00053 Accr-Chr13 554272 555816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00053 1 163 Orphan Transcription Factor Family AT1G06040 65.294 1.20e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Accr13g00053 zf-B_box 6.2e-08 No_clan