Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00047 ATGGATAATGACAAATCCTCAAGTTACGGTGGAGGTCTTCCACCTTCGGGACGTTATTCTGGCTTCTCACCTCCGGGAAGCTCTTTCAACGTGAAACCAGAAGGATCGTCGTCGTCATCTTTTCCTCCCCTGGTACCCGGTACCAGCTCGGACTCTAGCGGCTTCAGTCATGATATTAGCAGAATGCCTGATAATCCTCCTAGAAACAGGGGTCATAGGCGGGCCCATTCTGAGATTCTCACCCTGCCAGATGATCTTAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGTGCTGATGGGCCTTCCTTTTCTGATGAGACTGAGGAAGACTTACTGTCGATGTACCTTGATATGGATAAATTCAACTCTTCATCTGCCACGTCTGCATTTCAAGTGGGTGAGGCTGCAGCGTCAGCGCCAGCGCCAAAATTAGAACCTACATCAGGAATTGCTGCCTCTCCTGCAGACAATGCTGCTATGGATACTTATGAAAGGCCCAGAGTTAGGCACCAACATAGCCAGTCCATGGATGGGTCAACAACCATTAAACCTGAGATGCTAGTATCGGGTACTGAAGAAGTTTCTGCAGTTGATTCCAAAAAATCAATGTCAGCTGCCAAGCTTGCGGAACTTGCGTTAGTTGACCCAAAGCGTGCAAAAAGGATATGGGCAAACAGGCAGTCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGCTATATTGCTGAGCTTGAAAGGAAGGTGCAGACCCTTCAAACAGAAGCAACATCTTTGTCTGCACAATTAACTCTCCTGCAGAGAGATACGAATGGGCTGAATGCTGAGAACAGTGAACTGAAGCTGCGGTTGCAAACCATGGAACAACAAGTTCACTTGCAAGATGCTTTAAATGACGCTTTGAAAGAGGAGATTCAGCATTTGAAACTAGTAACGGGGCAGGCTATGATGAATGGGGGACCTGCGATGAACTTTGCTCCCTTTGGAGGAGGGCAGCAGTTTTATCCCAACAATCACACCATGCACACTCTATTGGCAACACAACAGTTTCAACAGCTCCAGATTCATTCTCAGAAGCAGCAGCAGCAACAGCTTCAGCAACACCAACTGCATCAGCTTCAGCAGCAACAAACCGGGGACTTGAAAATGAGAACAACTACTCGTTCTCCAAGCCCCAAAGATCGAAACCCACCGGCAGCCTAG 1197 0.4812 MDNDKSSSYGGGLPPSGRYSGFSPPGSSFNVKPEGSSSSSFPPLVPGTSSDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDLSFDSDLGVVGGADGPSFSDETEEDLLSMYLDMDKFNSSSATSAFQVGEAAASAPAPKLEPTSGIAASPADNAAMDTYERPRVRHQHSQSMDGSTTIKPEMLVSGTEEVSAVDSKKSMSAAKLAELALVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKLVTGQAMMNGGPAMNFAPFGGGQQFYPNNHTMHTLLATQQFQQLQIHSQKQQQQQLQQHQLHQLQQQQTGDLKMRTTTRSPSPKDRNPPAA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00047 398 MobiDBLite consensus disorder prediction 1 106 - -
Accr13g00047 398 Pfam bZIP transcription factor 217 273 IPR004827 GO:0003700|GO:0006355
Accr13g00047 398 Gene3D - 216 289 - -
Accr13g00047 398 SUPERFAMILY Leucine zipper domain 217 268 IPR046347 GO:0003700|GO:0006355
Accr13g00047 398 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 379 - -
Accr13g00047 398 MobiDBLite consensus disorder prediction 21 59 - -
Accr13g00047 398 MobiDBLite consensus disorder prediction 63 80 - -
Accr13g00047 398 FunFam probable transcription factor PosF21 216 269 - -
Accr13g00047 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 215 278 IPR004827 GO:0003700|GO:0006355
Accr13g00047 398 MobiDBLite consensus disorder prediction 362 391 - -
Accr13g00047 398 MobiDBLite consensus disorder prediction 362 398 - -
Accr13g00047 398 Coils Coil 233 302 - -
Accr13g00047 398 CDD bZIP_plant_RF2 218 267 IPR044759 GO:0003700|GO:0006355
Accr13g00047 398 SMART brlzneu 213 277 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00047 Accr-Chr13 506533 509560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00047 18 344 bZIP Transcription Factor Family AT1G06070 74.772 1.79e-172 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr13g00047 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00047 - - pcin:129313665 673.315