Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00029 ATGGCTTCCTGTCCTCCTTCTCTGCTCCTTTCACTCGGTTCTGCTTCTGGTAGAAGTCCCCAAGTCATTCCTCGGTGTCTGGCTGTGCATTGCTCAAGCTTCGATCTTCAAACCAGGTCTACGAGGGCGAAGGAATGCGTAGCCATTACGCGGAGGGACATTCTCGGCTTTGCTTTCGGAGCCCCAAGCCTCTTCATTTCTTCATTTCCTGCCAAAGGAGCTGGGTTGCCCCCAGAAGAAAAGCCAAGGCTCTGTGATGATACCTGTGAGAAAGAGCTTGAAAATGTGCCTATGATAACTACTGAGTCAGGTTTGCAATACAAGGATATTAAAGTTGGAAAAGGCTCCACGCCACCAGTCGGATTTCAGGTGGCTGCTAACTATGTTGCTATGATTCCATCTGGACAAATATTTGATAGTTCGTTGGAGAAAGGTCAGCCTTACATTTTTCGTGTTGGCTCTGGTCAGGTAATAAAGGGACTTGATGAAGGAATTTTGGGCATGAAAATAGGAGGAAAACGCCGGCTGTACATACCTGGATCATTGGCGTTCCCAAAAGGTCTTACATCTGCTCCAGGAAGACCAAGGGTGGCTCCAAACAGTCCAGTCATATTTGATGTTAGTCTGGAATATATCCCAGGACTTGAACTGGATGAGGAATAA 663 0.4706 MASCPPSLLLSLGSASGRSPQVIPRCLAVHCSSFDLQTRSTRAKECVAITRRDILGFAFGAPSLFISSFPAKGAGLPPEEKPRLCDDTCEKELENVPMITTESGLQYKDIKVGKGSTPPVGFQVAANYVAMIPSGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILGMKIGGKRRLYIPGSLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGLELDEE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00029 220 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 120 209 IPR001179 GO:0003755
Accr13g00029 220 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 72 213 - -
Accr13g00029 220 SUPERFAMILY FKBP-like 87 209 - -
Accr13g00029 220 Gene3D - 84 212 IPR046357 GO:0003755
Accr13g00029 220 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 121 213 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00029 Accr-Chr13 356895 360131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00029 103 209 Calmodulin-binding Proteins AT5G48570 41.667 9.30e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00029 K01802 - jre:108980458 326.635