Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00028 ATGGCTTCCTGTCCTCCTTCTCTGCTCCTTTCACTCGGTTCTGCTTCTGGTAGAAGTCCCCAAGTCATTCCTCGGTGTCTGGCTGTGCATTGCTCAAGCTTCGATCTTCAAACCAGGTCTACGAGGGCGAAGGAATGCGTAGCCATTACGCGGAGGGACATTCTCGGCTTTGCTTTCGGAGCCCCAAGCCTCTTCATTTCTTCATTTCCTGCCAAAGGAGCTGGGTTGCCCCCAGAAGAAAAGCCAAGGCTCTGTGATGATACCTGTGAGAAAGAGCTTGAAAATGTGCCTATGATAACTACTGAGTCAGGTTTGCAATACAAGGATATTAAAGTTGGAAAAGGCTCCACGCCACCAGTCGGATTTCAGGTTTTGAAGTCATCTGACTTATACAGTTCGTTGGAGAAAGGTCAGCCTTACATTTTTCGTGTTGGCTCTGGTCAGGTAATAAAGGGACTTGATGAAGGAATTTTGGGCATGAAAATAGGAGGAAAACGCCGGCTGTACATACCTGGATCATTGGCGTTCCCAAAAGGTCTTACATCTGCTCCAGGAAGACCAAGGGTGGCTCCAAACAGTCCAGTCATATTTGATGTTAGTCTGGAATATATCCCAGGACTTGAACTGGATGAGGAATAA 639 0.4726 MASCPPSLLLSLGSASGRSPQVIPRCLAVHCSSFDLQTRSTRAKECVAITRRDILGFAFGAPSLFISSFPAKGAGLPPEEKPRLCDDTCEKELENVPMITTESGLQYKDIKVGKGSTPPVGFQVLKSSDLYSSLEKGQPYIFRVGSGQVIKGLDEGILGMKIGGKRRLYIPGSLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGLELDEE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00028 212 Gene3D - 84 204 IPR046357 GO:0003755
Accr13g00028 212 SUPERFAMILY FKBP-like 87 201 - -
Accr13g00028 212 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 127 201 IPR001179 GO:0003755
Accr13g00028 212 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 132 205 IPR001179 GO:0003755
Accr13g00028 212 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 72 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00028 Accr-Chr13 356895 360131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00028 103 201 Calmodulin-binding Proteins AT5G48570 38.889 2.22e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00028 K01802 - jre:108980458 289.656