Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00022 ATGACGGCCAGCTCCTTCTGCAATGCTGACTCTGTGTTCTCGAGAGAAGAAGGCGTAGATATTAGAAAGATGATGGAACCAAAGAGAAGCCTCTGCTCTGTGGATCAAAGCAATTATTCCTCTATGGCATCTAAAAGACACAAGGCTGATTTATCCATCTCCACAAAGGAGAGGAAGGAGAAGATTGGGGAACGGATTGTTGCCTTGCAGCAGCTCGTTTCTCCATTTGGCAAGTCAGATACAGCTTCGGTCCTTTTAGAGGCAACTCACTATATAAGGTTCCTTCATAAACAAGTGCTTAGTGCTCCTTATTTGCAATGCTCTCCCACAACCAAAACGCAGGATTTAGAGGAGTGGAGCCTGAGGAGTAGAGGATTATGTCTGGTTCCTGTATCGTATACGATTGGAGTTGCTCAGAGCAATGGTGCAGATATATGGGCCCCCACCAAAAGCACATCGTCACAATTTGACTAG 474 0.4557 MTASSFCNADSVFSREEGVDIRKMMEPKRSLCSVDQSNYSSMASKRHKADLSISTKERKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIRFLHKQVLSAPYLQCSPTTKTQDLEEWSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKSTSSQFD 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00022 157 CDD bHLH_AtbHLH_like 52 99 IPR045239 -
Accr13g00022 157 Gene3D - 42 107 IPR036638 GO:0046983
Accr13g00022 157 SMART finulus 52 101 IPR011598 GO:0046983
Accr13g00022 157 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 100 IPR036638 GO:0046983
Accr13g00022 157 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Accr13g00022 157 FunFam Transcription factor bHLH113 family 45 119 - -
Accr13g00022 157 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00022 Accr-Chr13 292520 295638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00022 24 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 55.921 2.80e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00022 - - pcin:129312787 281.567