Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00015 ATGGGAAAGAAGGGAAGTTGGTTTTCCGCAATCAAGAGGGTTTTCAGTCACCACTCCAAGGAAAAGGTAGTCAATGATTCTGAAAGTAAAATTACAAAAGAAAAGAAGAAGAAAGGTCTCGGAAAACTAAGGCATGGAGAGACAAATTCGTTCATTCCCCTCTTCAGGGAGCCAAGCAGCATTGAAAAAATCTTTGGGGACTTCGAAAGAGAGCAACAATTACGAACTTTCAGGCCTCACACGCCTCCTGAGCTACCTAAAACTCCACCTTTTGTGCCTCCCAGAGCCGCTTCTCCCAGGGCTCCTTCACCAAAGACTGCTTCTCCAAGTGCTCCCTCTCCAAGGGTTGCTTCTCCGAGAGCAGCATCTCCTAGGAGGATTGTTCATTACCACAGACCAGAACCAACGCTAAGGAACCACCATGCCTCAGCAACTAAGATCCAGGCTGCGTATAGAGGTTATATGGCTAGGAGGAGTTTTAGAGCTCTGAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAAAATGTGAAGAGGCAGACGATGAATGCCATGAAATACATGCAGTTGTTGGTGCGGGTTCAATCTCAGATTCAATCCCGGAGGATCCAGATGTTGGAGAACCAGGCACGATATCAAGCTGAATACAAGAATGATAAAGAAGTGGCAAGTACCTTGGGCAAGTTGACTCTAGGCCATGGAGAGGCGGGTAATCATGAAGATTGGGATGACAGCTTACTTACAAAAGAGGAAATAGAGGCAAGGTTGCATAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATATGCATATTCCCATCAGTTGTGGAAAGCCACTCCTACATCAACCCATACACCAGGGTCTGGGGGATTTCCATGGTGGTGGAACTGGTTGGAAAGGCAGCTGCCCTCAGCAAATTCACAAGGAGGCCAAGTCTTGAAGAATTTTCAACTTACACCTCCCAGACCATATTCTGAACAGAAGACTAATCCACAACCTGCCTCAAACACCCCTAAGCAGCACCGCTATGGGTTTGATAATATGGATGCAGCCACACCAAAATCCACTAAATCAGCTGTAGTGTCATCCGCAAAACCAGCAAGAACCCCACAAGCAAACAGCTCGAGCTTGCCAAAGTATTCGAGAGCAAGGGTAGGGGGAACTGAATCACCTTTTGATGTGCCACTCAAGGATGATGATAGCCTCACAAGCTGTCCACCATTTTCAGTACCGAACTACATGGCTCCAACCCAATCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATGTAAGAGAGAGTTTTCCTGGGACTCCAAACTCTGAATCAAAGAGGCGACTTTCATTTCCTCTTACGCAAGGAATTGGATCCTTTAAATGGACAAAAGGGAACTTGTTCTCAAGTAAGGATCCTAGGTCCCAAAGGATGTTAGATAAGAACCAGTCACTTCAATCTTTAGGAAACTTGAGTGTGGATTCAACGGTGTCTTTACCCGCAGGGGTTGGAAGGAAACCGTTTAACAGATTTGTGTGA 1542 0.463 MGKKGSWFSAIKRVFSHHSKEKVVNDSESKITKEKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLRTFRPHTPPELPKTPPFVPPRAASPRAPSPKTASPSAPSPRVASPRAASPRRIVHYHRPEPTLRNHHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTMNAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNDKEVASTLGKLTLGHGEAGNHEDWDDSLLTKEEIEARLHRKVEAIIKRERAMAYAYSHQLWKATPTSTHTPGSGGFPWWWNWLERQLPSANSQGGQVLKNFQLTPPRPYSEQKTNPQPASNTPKQHRYGFDNMDAATPKSTKSAVVSSAKPARTPQANSSSLPKYSRARVGGTESPFDVPLKDDDSLTSCPPFSVPNYMAPTQSAKAKVRASSNVRESFPGTPNSESKRRLSFPLTQGIGSFKWTKGNLFSSKDPRSQRMLDKNQSLQSLGNLSVDSTVSLPAGVGRKPFNRFV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00015 513 MobiDBLite consensus disorder prediction 18 35 - -
Accr13g00015 513 SMART iq_5 139 161 IPR000048 GO:0005515
Accr13g00015 513 MobiDBLite consensus disorder prediction 318 346 - -
Accr13g00015 513 MobiDBLite consensus disorder prediction 82 109 - -
Accr13g00015 513 MobiDBLite consensus disorder prediction 18 54 - -
Accr13g00015 513 Pfam Protein of unknown function (DUF4005) 373 459 IPR025064 -
Accr13g00015 513 PANTHER IQ-DOMAIN 5-RELATED 1 455 - -
Accr13g00015 513 MobiDBLite consensus disorder prediction 355 385 - -
Accr13g00015 513 MobiDBLite consensus disorder prediction 76 125 - -
Accr13g00015 513 ProSiteProfiles IQ motif profile. 140 168 IPR000048 GO:0005515
Accr13g00015 513 Pfam IQ calmodulin-binding motif 141 161 IPR000048 GO:0005515
Accr13g00015 513 Gene3D - 138 192 - -
Accr13g00015 513 MobiDBLite consensus disorder prediction 428 448 - -
Accr13g00015 513 MobiDBLite consensus disorder prediction 318 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00015 Accr-Chr13 208392 213268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00015 1 512 IQD Protein Family AT3G59690 52.424 4.32e-163 471