Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00007 ATGGAAAACATTGCCGCGCAATTGAAGCAAGGCATCTCTCGCCAATTTTCCACCGGCTCTCTGCGCCGGAGTTTGAGCCGGAAGTTCTCACGGCAGTCGTCCTTGGATCCTAGACGCAACAATCTTAGGTTCAGTTTCGGTCGCCAGTCATCGCTCGATCCGATTCGCCGCAGTCCCAGTAATGACAATGACCTGACAGTGCCAGAGAATCTCGACTCCACGATGCAGTTGCTGTTCATGGCCTGCAGAGCGGACGTTAAGGGAGTGGAGGATTTGCTGAATGAGGGCATTGATGTCAATAGCATTGATTTGGATGGCCGCACCGCGTTGCATATCGCTGCCTGTGAAGGACATGTGGAGGTTGTAAAGCTCTTGCTCAGCCGCAAGGCTAATATTGACGCTCGAGATCGTTGGGGCAGTACGGCTGCTGCTGACGCCAAATATTACGGAAATACTGAAATTTACAACATATTGAAGACCCGTGGAGCCAAAGTCCCGAAAACCAGGAAGACTCCGATGTCTGTTGCAAATCCTCGTGAAGTTCCCGAATACGAACTTAATCCCTTAGAACTCCAGGTCCGGAAGAGTGATGGCATTTCAAGGGGGGCATATCAAGTAGCCAAATGGAATGGCACAAAGGTTTCAGTCAAGATCCTTGATAAGGACTGTTATTCAGATCCTGATAGCATAAATGCTTTCAAACATGAGCTCACCTTATTGGAGAAGGTACGGCATCCTAACGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAATATACCCATGATGATAGTTTCGGAGTATCATCCTAAGGGTGATCTAGCTAGCTATCTTCAAAAGAAAGGTCGTCTGTCCCCATCGAAAGCTCTACGCTTCGCCCTTGATATTGCTAGGGGCATGAATTATCTTCATGAATGCAAGCCAGATCCTATTATCCACTGTGACTTAAAGCCAAAAAATATTTTGCTGGATAGTGGAGGACAGCTGAAGGTAGCTGGATTTGGTATGGTAAGATTGTCAAAGATTTCACCTGACAAAACAAGGCTGGTGCAGCCTGGGGCTAACATTGACCTTTCAAGCTTGTACGTGGCACCAGAGATTTACAAAGATGATACGTTTGATAGAAGTGTGGATGCATATTCCTTTGGTCTCATTGTATATGAGATGATAGAGGGTATACAGCCCTTACACCCGAAGCCCCCGGAGGAGGCCTTGAAACTTATGTGCATAGAAGGAAAAAGGCCACCATTCAAAATCAAAACAAAAAGTTATCCTCCAGATTTGAGAGAGTTGATTGAGGAATGTTGGGACCCAGAACCTCTTGTCAGACCTACATTTTCAGAAGTCATTGTGCGATTGGACAAAATTGTTGCAAACTGCTCAAAACAAGGGTGGTGGAAAGATACTTTCAAGCTTCCTTGGAAATAA 1425 0.4618 MENIAAQLKQGISRQFSTGSLRRSLSRKFSRQSSLDPRRNNLRFSFGRQSSLDPIRRSPSNDNDLTVPENLDSTMQLLFMACRADVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVVKLLLSRKANIDARDRWGSTAAADAKYYGNTEIYNILKTRGAKVPKTRKTPMSVANPREVPEYELNPLELQVRKSDGISRGAYQVAKWNGTKVSVKILDKDCYSDPDSINAFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVSEYHPKGDLASYLQKKGRLSPSKALRFALDIARGMNYLHECKPDPIIHCDLKPKNILLDSGGQLKVAGFGMVRLSKISPDKTRLVQPGANIDLSSLYVAPEIYKDDTFDRSVDAYSFGLIVYEMIEGIQPLHPKPPEEALKLMCIEGKRPPFKIKTKSYPPDLRELIEECWDPEPLVRPTFSEVIVRLDKIVANCSKQGWWKDTFKLPWK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00007 474 Gene3D Phosphorylase Kinase; domain 1 188 268 - -
Accr13g00007 474 SMART serkin_6 193 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00007 474 PIRSF ILK 8 473 - -
Accr13g00007 474 SUPERFAMILY Ankyrin repeat 73 175 IPR036770 -
Accr13g00007 474 SUPERFAMILY Protein kinase-like (PK-like) 202 452 IPR011009 -
Accr13g00007 474 FunFam Os01g0748600 protein 179 471 - -
Accr13g00007 474 PRINTS Tyrosine kinase catalytic domain signature 265 278 IPR001245 GO:0004672|GO:0006468
Accr13g00007 474 PRINTS Tyrosine kinase catalytic domain signature 423 445 IPR001245 GO:0004672|GO:0006468
Accr13g00007 474 PRINTS Tyrosine kinase catalytic domain signature 304 322 IPR001245 GO:0004672|GO:0006468
Accr13g00007 474 PRINTS Tyrosine kinase catalytic domain signature 376 398 IPR001245 GO:0004672|GO:0006468
Accr13g00007 474 FunFam Integrin-linked protein kinase 1 47 184 - -
Accr13g00007 474 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
Accr13g00007 474 Pfam Protein tyrosine and serine/threonine kinase 202 451 IPR001245 GO:0004672|GO:0006468
Accr13g00007 474 ProSiteProfiles Protein kinase domain profile. 189 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g00007 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Accr13g00007 474 Gene3D Transferase(Phosphotransferase) domain 1 269 468 - -
Accr13g00007 474 FunFam serine/threonine-protein kinase STY46-like 186 269 - -
Accr13g00007 474 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
Accr13g00007 474 Gene3D - 44 184 IPR036770 -
Accr13g00007 474 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 141 455 - -
Accr13g00007 474 SMART ANK_2a 73 101 IPR002110 GO:0005515
Accr13g00007 474 SMART ANK_2a 138 167 IPR002110 GO:0005515
Accr13g00007 474 SMART ANK_2a 105 134 IPR002110 GO:0005515
Accr13g00007 474 CDD STKc_MAP3K-like 199 452 - -
Accr13g00007 474 Pfam Ankyrin repeats (3 copies) 79 165 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00007 Accr-Chr13 100899 127548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00007 1 474 MAP Kinase Kinase Kinase AT2G31800 79.622 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Accr13g00007 PK_Tyr_Ser-Thr 2.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00007 - - qsa:O6P43_028049 874.389