Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01889 ATGGAGGAGAAGAAAGAGGAGAAGCCGACAAAAGAAGTGCGGTACCGTGGTGTCCGGCGGCGGCCATGGGGGAAGTTTGGAGCGGAGATAAGAGACCCGACGAAGCAAGGGGCAAGGCTGTGGCTGGGAACATTTGAGACAGCTGAAGAGGCGGCAAGAGCATATGACGAAGCAGCATACAACTTCCGAGGTCATCTTGCAGTTCTTAATTTCCCCGAACACTACAATCTTCCTCCTCCGCCGCCATATCAACCACTCTCTTCTGACAGCGCAAGTTCCTCAACTGCTGGACAGCACGCCCCAAGGGAAGTTATTGAGTTTGAATGTTTGGAAGATAAGGTTTTGGAAGAGCTTCTTGAATCTCAGGAGAAGAAGAACAAACAAGATTGA 390 0.5051 MEEKKEEKPTKEVRYRGVRRRPWGKFGAEIRDPTKQGARLWLGTFETAEEAARAYDEAAYNFRGHLAVLNFPEHYNLPPPPPYQPLSSDSASSSTAGQHAPREVIEFECLEDKVLEELLESQEKKNKQD 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01889 129 Gene3D AP2/ERF domain 13 74 IPR036955 GO:0003700|GO:0006355
Accr12g01889 129 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
Accr12g01889 129 FunFam Ethylene-responsive transcription factor 2 13 73 - -
Accr12g01889 129 ProSiteProfiles AP2/ERF domain profile. 14 72 IPR001471 GO:0003700|GO:0006355
Accr12g01889 129 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Accr12g01889 129 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Accr12g01889 129 MobiDBLite consensus disorder prediction 73 102 - -
Accr12g01889 129 Pfam AP2 domain 14 65 IPR001471 GO:0003700|GO:0006355
Accr12g01889 129 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Accr12g01889 129 CDD AP2 14 74 IPR001471 GO:0003700|GO:0006355
Accr12g01889 129 PANTHER DNA-BINDING DOMAIN 5 123 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01889 Accr-Chr12 36948712 36949101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01889 11 125 AP2-EREBP Transcription Factor Family AT3G23230 61.789 2.64e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr12g01889 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01889 - - aew:130765929 157.147