Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01881 ATGGCAGGACAATTGGGAGTGCTAAGTGCACTCGACACAGCCAAAACTCAATGGTATCACTTCACAGCAATAGTAATCGCAGGAATGGGCTTTTTCACAGACGCCTATGATCTGTTTTGCATCTCCATTGTCACCAAGCTCCTCGGCCGTATTTACTACACCGAGCCCGGCAAGGGCGTGGGCACCCTACCTGATGGCACTCAATCAGCGGTAATTGGTGTCGCTCTATGCGGCACCCTTGCCGGGCAATTATTCTTTGGTTGGCTTGGCGACAAACTTGGCCGAAAAAAGGTCTACGGCTTAACCCTCATGCTCATGGTTGTCTGCTCAATTGGCTCTGGCCTCTCATTTGGCTCCACGCCAAAAGGGGTCATGACCACACTTTGCTTCTTCCGCTTCTGGCTCGGCTTCGGAATTGGCGGCGACTACCCTCTCTCAGCCACCATCATGGCTGAATATGCCAACAAGAAAACTCGAGGAGCTTTCATAGCTTCAGTTTTTGCTATGCAAGGGTTCGGTATTCTGGGTGGTGGTATTGTTGCTTTGATAGTGGCATCCATTTATGACCACAAATATAATGCCCCTAGCTTTGCCGAAAACGCTTCCAAGTCTTTAGTTTTGCCTGCTTTTGATAACGTTTGGCGAATTGTTCTGATGTTTGGTGCCGTCCCTGCGGCTCTTACATATTACTGGCGCATGAAAATGCCTGAGACAGCTCGTTACACTGCGCTTGTTGCGAAAAACGCAAAGCAAGCGGCCAAAGACATGTCAAAGGTCCTAAATGTGGAATTGGACGCTGAAGAAGACAAAGTGAAGAAACTGACAGAGGATAGGAACCATATATATGGTTTGTTCAGCAAAGAATTTGTGAAACGACATGGCTTGCATTTGGTGGGGACCACAACCACTTGGTTCTTATTGGACATCGCGTTCTATAGCCAGAACCTATTTCAAAAGGATGTTTTTACTAGTATTGGGTGGCTTCCACAACCAGCAGAAATGAGTGCTATCCACGAGGTTTACAGGATTGCTAAAGCACAAACTCTTATAGCACTTTGTAGTACCGTCCCAGGGTATTGGTTCACCGTGGCTTTGATTGATCACATGGGTCGTTTTGCGATCCAGGTAATGGGGTTCTTCTTCATGACAGTCTTCATGTTCGCTCTTGCTATACCTTACGATCATTGGAAAAAGCCTGGCAATCAAATCGGGTTCGTTGTTATGTATTCTTTAACGTTCTTCTTCTCCAATTTTGGCCCAAATGCGACTACGTTTGTGGTTCCCGCAGAGATATTCCCGGCGAGGCTACGTTCAACCTGCCATGGAATTTCGGCGGCGTCAGGGAAAGCCGGAGCCATAGTTGGAGCGTTTGGGTTCGCATATGCGTCTACAGGTAAAGGGATTGGTATGAAGAACTCACTGATTTTGCTTGGAGCGGTGAACTTTTTGGGACTGCTCTTCACATTTTTGGTGCCAGAGCCAAAGGGCAAGTCGCTTGAGGAATTGAGCGGGGACAACGACGATGAGGCGGCAAATACTAAGACACCTGTTTAA 1554 0.4762 MAGQLGVLSALDTAKTQWYHFTAIVIAGMGFFTDAYDLFCISIVTKLLGRIYYTEPGKGVGTLPDGTQSAVIGVALCGTLAGQLFFGWLGDKLGRKKVYGLTLMLMVVCSIGSGLSFGSTPKGVMTTLCFFRFWLGFGIGGDYPLSATIMAEYANKKTRGAFIASVFAMQGFGILGGGIVALIVASIYDHKYNAPSFAENASKSLVLPAFDNVWRIVLMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAAKDMSKVLNVELDAEEDKVKKLTEDRNHIYGLFSKEFVKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDVFTSIGWLPQPAEMSAIHEVYRIAKAQTLIALCSTVPGYWFTVALIDHMGRFAIQVMGFFFMTVFMFALAIPYDHWKKPGNQIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFAYASTGKGIGMKNSLILLGAVNFLGLLFTFLVPEPKGKSLEELSGDNDDEAANTKTPV 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01881 517 Gene3D MFS general substrate transporter like domains 19 264 IPR036259 -
Accr12g01881 517 Gene3D MFS general substrate transporter like domains 271 516 IPR036259 -
Accr12g01881 517 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 496 IPR020846 GO:0022857
Accr12g01881 517 CDD MFS_PhT 24 495 - -
Accr12g01881 517 Coils Coil 257 277 - -
Accr12g01881 517 SUPERFAMILY MFS general substrate transporter 11 503 IPR036259 -
Accr12g01881 517 FunFam Inorganic phosphate transporter 1-6 19 516 - -
Accr12g01881 517 NCBIfam phosphate:H+ symporter 10 504 IPR004738 GO:0005315|GO:0006817|GO:0016020
Accr12g01881 517 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 494 - -
Accr12g01881 517 Pfam Sugar (and other) transporter 24 502 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01881 Accr-Chr12 36767488 36769041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01881 4 507 Inorganic Solute Cotransporters AT5G43350 74.419 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01881 K08176 - gmx:100780201 824.698