Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01875 ATGAGACTCAGAGATCTTCGTCTCAAGCTCAAGGCATTAAGGCTAAAGCGATTAGTATGGAGGTTTAATGGAGGCAAGAGAAGGAGGAGGATTAAGAAGAATCCATCATGGATGAACCCAGCAGTGTCACATGGATGTCACGTGATCAATCGGCGAATACTCGGAGGATACTGTTCCGATGACTATGAAGAGTGTGATTCAGTTGTGGTACAGAGAGAACAGACGGAAAACACAGAGCTTTGGTATTTCGGAATATTTGATGCTCTAATTGGAGATGGCATCACCAAGTATATGCAATCACATTTATTTCAGAAGCAGCTTGAAGAGTCTCATATGAGTAGAAAATGCAAAGAGACATTGAAGAGAGCATACTCAAGTTCCACAGCTAAGATATTGAGATCAGAGGATGATGAGAGGACGAGTCGCCGAGTTGGCTCAGTATCAGCACTGGTCATCAATGGCGAAAAGCTTGTGACTGCCCAAATTGGAAATTGCAAGGCTGTTGTGTGCAGAGATGGGATTGCTTATCACACAAACCCCACTCCTCAACAACACTTAGACAAATTACCCCATTGGAGTCACAAACTCTTCCCTGGCGCACGTGGAAGGCAGTCTAGAAGATCAGAACTTGTGGTCAAAGCTGAAAGGATTGATTCTGATACTGAATTTTTGATCTTAGCCACCAGTGGCATATGGAACGTGATGAAGTGTCAAGAGGCAGTGAATCTCATAAGGCACATAGAGAATCCCAACGAAGCTGCTAAATGCTTGGCTAATGAAGCTTTGAATAGAATGAGCAAAACCAACATCTCTTGCATTATTATTCGATTCGACTAA 837 0.4301 MRLRDLRLKLKALRLKRLVWRFNGGKRRRRIKKNPSWMNPAVSHGCHVINRRILGGYCSDDYEECDSVVVQREQTENTELWYFGIFDALIGDGITKYMQSHLFQKQLEESHMSRKCKETLKRAYSSSTAKILRSEDDERTSRRVGSVSALVINGEKLVTAQIGNCKAVVCRDGIAYHTNPTPQQHLDKLPHWSHKLFPGARGRQSRRSELVVKAERIDSDTEFLILATSGIWNVMKCQEAVNLIRHIENPNEAAKCLANEALNRMSKTNISCIIIRFD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01875 278 Gene3D - 200 278 IPR036457 -
Accr12g01875 278 Gene3D - 58 194 IPR036457 -
Accr12g01875 278 SUPERFAMILY PP2C-like 66 278 IPR036457 -
Accr12g01875 278 SMART PP2C_4 49 275 IPR001932 -
Accr12g01875 278 PANTHER PROTEIN PHOSPHATASE 64 277 IPR015655 GO:0004722|GO:0006470
Accr12g01875 278 Pfam Protein phosphatase 2C 214 270 IPR001932 -
Accr12g01875 278 Pfam Protein phosphatase 2C 77 177 IPR001932 -
Accr12g01875 278 CDD PP2Cc 65 277 IPR001932 -
Accr12g01875 278 ProSiteProfiles PPM-type phosphatase domain profile. 64 277 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01875 Accr-Chr12 36507944 36510612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01875 1 277 PP2C-type Phosphatase Gene Family AT3G23360 48.239 2.27e-77 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01875 K19704 - pvy:116135907 278.485