Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01873 ATGGAAAACAAAGACACGAAGGTGTTAAGCTTCTGGGTCAGTCCATTTGGTTTGAGGGTTGAGTGGGCACTGAAGCTGAAGGGCGTGGAGTATGAGTATATTGAAGAAGATGTCTTCAACAAAAGCAATCTTCTTTTGCAAATGAATCAAGTTCATAAGAAAGTTCCAGTTCTGATTCATCATAACAAACCCATCTGTGAGTCGTTTGTCATCATGGAATACATCGATGAGACTTGGACTCAATATCCATTGATGCCTCAGGAACCTCATCAAAGAGCTGTGACTCGTTTCTGGGCCTCCTTTGCTGAAGAAAAGGTACTACAAGCTGCTGGGAAGGCTATGATGTTTAGTGGGGATGAAAAGAAAAACAACGCAGAAAACGCAAAAGAAGCAATGGAGAAGATAGAAGAATTAATAAAAGGTAAAAAATTCTTTGGTGGGGAAAATATTGGATACTTGGACCTTGCATTAGGGTGGATCTCTTATTTTCTTCCTGTGATGGAAGAAGCTGGAAACTTCCACATAATGGACCCACTGGAGTTTCCTGCGATCAGTTCTTGGAAGAAGAACTTTCTGGATCATCCAATCATCAAGGACACTCCACCCCCAAGGGAGAAGACACTCTGTCATTTACAGAGTCGCATAATTGCTTTCGCTTCCAGATCTGGCGACTAG 675 0.4207 MENKDTKVLSFWVSPFGLRVEWALKLKGVEYEYIEEDVFNKSNLLLQMNQVHKKVPVLIHHNKPICESFVIMEYIDETWTQYPLMPQEPHQRAVTRFWASFAEEKVLQAAGKAMMFSGDEKKNNAENAKEAMEKIEELIKGKKFFGGENIGYLDLALGWISYFLPVMEEAGNFHIMDPLEFPAISSWKKNFLDHPIIKDTPPPREKTLCHLQSRIIAFASRSGD 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01873 224 CDD GST_N_Tau 7 79 - -
Accr12g01873 224 Gene3D Glutaredoxin 1 84 - -
Accr12g01873 224 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Accr12g01873 224 SUPERFAMILY GST C-terminal domain-like 77 212 IPR036282 -
Accr12g01873 224 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Accr12g01873 224 FunFam Tau class glutathione S-transferase 1 87 - -
Accr12g01873 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Accr12g01873 224 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Accr12g01873 224 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Accr12g01873 224 FunFam Tau class glutathione S-transferase 85 221 - -
Accr12g01873 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 206 IPR045073 -
Accr12g01873 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Accr12g01873 224 Coils Coil 118 138 - -
Accr12g01873 224 Gene3D - 85 219 - -
Accr12g01873 224 SFLD Main (cytGST) 2 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01873 Accr-Chr12 36406884 36410147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01873 2 220 Glutathione S-transferase Gene Family AT3G09270 43.439 6.79e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01873 K00799 - gmx:547583 311.227