Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01862 ATGGCGCTGAAACGTGCTTTTCCCTTGGACGAAACCCCCTTAGCTTCCTCTTCAACCGAGGAAGTAGAGGAAACTTCATCTGAAGACGACGATCAACCCCCAAAACTTGCACAATGCCTCTCCACTGAGAAGAAGCCCGCTGCCAAAAAGCCTACACCTGCTGCTCCAATCGCAAAGTCTCAACCGAAAGCTTCAGTATCGGAATCTGAGACAGAGTCTGATGCCGGATCTGACTCCGATGACGAGCGCCCTAGTGAGAATACAGATCTGGTTGTCAAGCCCATTGCCTTCAAGCCTAAAGAAGAAATGCCTAAAGCAAAGAAGTTGAAGTCTCAGCCACCCGTTTCTCCGGAAAAATCAACCAACAAGCGACCGAGTGACAAGAATCGGGGTGTCACTGACTCGAAACAGGCGAAGAAGAGGAAGGATGCTTCTGGAAACGATGACATCCCGGCGGCAGAGGATGACGGTAAAAAAGCTGGGGATGAGTTCAAGAAACTTTTTCAGAGACTGTGGAGTGAAGACGATGAGATTGCGATCCTCATGGGTTTAGCGGAATATGCAGGAGAAGCCCCACTAAAGACTACTAATGGTTTACACGATTTCATAAAGAAGTCAATCCATGTGGATGTTTCAAATGAACAAGTGGCGAATAAGATTAGGACTTTGAGGAGAAAGTACCTGACGAATGCCCAAAGAGGGAAAAATGGTGAAGGCCCTAGGTTTTCTAAACCATACGATCAGAAAGTATTTGAATTGTCAAGGAAGATCTGGGCTAACGAAGGAGTCAATGGAGGAATAGACATTAAAAAGTCGGATGGGAAAGTGAAGAAAAAAATGCAGGACAGTAAAATCGTTGCAGCGTCTAAGAAACCGGAGGCTGATCTGATTGATCTGGTTTCAGATTCACTGGAGGCTGATCTGGTTGATCTGGTTTCAGATTCACTGGAGGCTGATCTGGTTTCAGATTCGAATGAAGCTAGAAAGGCTGATCTGAGTCTAAGTGAAATGATTAGGTTCAACAGAAGTCTGGGCCTGTCAAGGTTGGATGATGATGCTTTTAAGAGGGGATATGAATTGATTGGAGGTTCCAAGAAGGCAGAGCTGGAGGACAGGTGGAAAAAACTGCAAATTGCAGAGTTTGAGCTGTTTGTGAAACGAATTGAGCTTGTCAAGGATGAGGCTAGTTTGATATGGGAGGCTACCAATTCTTCAGGCAATTAG 1224 0.4559 MALKRAFPLDETPLASSSTEEVEETSSEDDDQPPKLAQCLSTEKKPAAKKPTPAAPIAKSQPKASVSESETESDAGSDSDDERPSENTDLVVKPIAFKPKEEMPKAKKLKSQPPVSPEKSTNKRPSDKNRGVTDSKQAKKRKDASGNDDIPAAEDDGKKAGDEFKKLFQRLWSEDDEIAILMGLAEYAGEAPLKTTNGLHDFIKKSIHVDVSNEQVANKIRTLRRKYLTNAQRGKNGEGPRFSKPYDQKVFELSRKIWANEGVNGGIDIKKSDGKVKKKMQDSKIVAASKKPEADLIDLVSDSLEADLVDLVSDSLEADLVSDSNEARKADLSLSEMIRFNRSLGLSRLDDDAFKRGYELIGGSKKAELEDRWKKLQIAEFELFVKRIELVKDEASLIWEATNSSGN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01862 407 Pfam Protein of unknown function, DUF573 168 258 IPR007592 GO:0006355
Accr12g01862 407 PANTHER BNAANNG10740D PROTEIN-RELATED 60 396 IPR007592 GO:0006355
Accr12g01862 407 MobiDBLite consensus disorder prediction 1 161 - -
Accr12g01862 407 MobiDBLite consensus disorder prediction 121 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01862 Accr-Chr12 35971759 35972982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01862 4 402 GeBP Transcription Factor Family AT1G61730 29.298 2.43e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Accr12g01862 DUF573 5.5e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01862 - - pcin:129300518 527.709