Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01785 ATGCAATTCGTATCTCGCACTTTCATTTTTCTTATCATTTTCAGCTGTGTGTGTAATGCGAATGATTGTTCTAATCCTTCAAAAGTTCTTACTGTTGGTAAGATTGGGCGAGGAAAGTTCAGAACAATTCAAAGGGCCATTAACACTATCCCAATCGACAACACTCGATGGATTCACATCCGAATCGATGCAGGAAATTATACGGAAAAGGTAATAATACCAATAGACAAACCTTGCGTATGTCTCGAAGGAGCTGGAAGTTCTTCAACAAATGTTCTGTGGAGTGACCATGACCAAACAACAGAAAGTTTTACTTTTGAGTCAAATGCACCTAACGTTATAGTTAAGGGCATTAAATTCGAGAACTCGTATAATCATCCGCCGGGTCAAGACGACGATGATAAAATTCTGCCAGCACTAGCAGGTGCAGTGAGAGGAGACAAAACTGCAATCTATGATTGTGTCTTCAAAGGTGTCCAAGACACTTTAATGGATGATACAGGTCGTCATTATTACCATAACTGCTACATTCAAGGTCAAACTGATTTTATTTTTGGAAAAGGCCAATCAATCTATCAGAATTGCACAATTTATTTTAAATCAGGAGATGGTCGAAATGGTTTTATAGCGGCACAAAAGAGAGAGTCCATTAAAGAAACAAGTGGGTATGTGTTCAATGGATGCGTCGTGGATGGAATTGGACAAACAATGCTTGGAAGAGCTTATGGACCATATTCTAGGGTTATTATCGCCAATTCATATCTCTCTAGTGTGGTTGACCCTGTGGGATGGAATGCTTGGCATCAATCCGACGTAGAAAAGATCACATTTGTGGAGGAAGAAAACAAAGGACCAGGGGCAAATAAGTCAAAACGAGTGTCGTGGATGAAGAACATGACTAAGGAGGAACTCCACAAGTTCTTGGATCTCTCTTACATCGACCATGAGGGATGGCTAAACAACCGACCAAGTAGTTTGAATTCTTAA 987 0.4002 MQFVSRTFIFLIIFSCVCNANDCSNPSKVLTVGKIGRGKFRTIQRAINTIPIDNTRWIHIRIDAGNYTEKVIIPIDKPCVCLEGAGSSSTNVLWSDHDQTTESFTFESNAPNVIVKGIKFENSYNHPPGQDDDDKILPALAGAVRGDKTAIYDCVFKGVQDTLMDDTGRHYYHNCYIQGQTDFIFGKGQSIYQNCTIYFKSGDGRNGFIAAQKRESIKETSGYVFNGCVVDGIGQTMLGRAYGPYSRVIIANSYLSSVVDPVGWNAWHQSDVEKITFVEEENKGPGANKSKRVSWMKNMTKEELHKFLDLSYIDHEGWLNNRPSSLNS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01785 328 SUPERFAMILY Pectin lyase-like 26 321 IPR011050 -
Accr12g01785 328 Pfam Pectinesterase 31 314 IPR000070 GO:0030599|GO:0042545
Accr12g01785 328 FunFam Pectinesterase 24 323 - -
Accr12g01785 328 Gene3D - 28 327 IPR012334 -
Accr12g01785 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01785 Accr-Chr12 32814966 32819352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01785 3 322 Carbohydrate Esterase AT5G47500 34.551 8.84e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01785 - - lang:109339855 330.102