Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01772 ATGTGTCTGGGCTTATTGGGATCTGAATTAGCAAATGCCCAGTTTTATCAGAAAGTCGGAGGTAAACTAGTTCCTTACAGAAAGATTATCGTTGACCCAGCCGGCACCGGCAACTTCACCACCATCCAAAAAGCCATAAACTCGGTCCCTTCCAACAACAACTATTGGGTTTCCATCTATATAAAGGCCGGCATATACAGGGAAAAAGTGAGGATTCCTGATGATAAACCTTATATAGTGTTGAAAGGAGCAGGGAAGAATAGAACTATTGTTGTTTGGGATGATCATAAACCAGTGGTAGAGACTTCTACGTTTTCGTTGCTGGCTGATAATGTCGTTGTCAAATGTTTGAGCTTTCAGAATTCATATAATAATCCAATTAACAACAATCCAAGGAATGCGGCGGTGGCGGCGATGGTGGCCGGAGACAAGGCTTCCTTCTACAGAGTTGGGTTCTATGGATTACAAGACACATTATGGGATGCTCAAGGAAGGCATTACTACAAACTTTGTACCATTCAAGGTGCTGTTGATTTTATTTTTGGTGCTGGTCAATCTATATTTGAGAGATGTTCGATATCAGTGATTGCAGGAGCCCTAGATGGGCTTCCAGGGTTTATAACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGGTTTGTGTTTAAATATTGCAACGTGTTTGGGAATGGTACAACTTACTTGGGAAGGCCTTGGAGAAGCTATTCAAGAGTTCTCTTCTACAAAACCAACATGTCTCAAGTTGTTGAACCTGAGGGCTGGAAGCCTTGGAATTTTTCTACTAATGTGAAACAGGTAACATTTGCAGAGTATGGGTGTTTTGGGCCTGGGTCCAACACTTCACAACGAGTAAGCTGGTCCAAGACTAATCTTGATTCCATGTTTGTGAAGCAAATGGCTAATATGAGCTTCATTGATTCTGAAGGATGGCTGCAGAATCAACTTTTCTGA 975 0.4174 MCLGLLGSELANAQFYQKVGGKLVPYRKIIVDPAGTGNFTTIQKAINSVPSNNNYWVSIYIKAGIYREKVRIPDDKPYIVLKGAGKNRTIVVWDDHKPVVETSTFSLLADNVVVKCLSFQNSYNNPINNNPRNAAVAAMVAGDKASFYRVGFYGLQDTLWDAQGRHYYKLCTIQGAVDFIFGAGQSIFERCSISVIAGALDGLPGFITAQGRTNPNDANGFVFKYCNVFGNGTTYLGRPWRSYSRVLFYKTNMSQVVEPEGWKPWNFSTNVKQVTFAEYGCFGPGSNTSQRVSWSKTNLDSMFVKQMANMSFIDSEGWLQNQLF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01772 324 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 26 320 - -
Accr12g01772 324 Pfam Pectinesterase 29 314 IPR000070 GO:0030599|GO:0042545
Accr12g01772 324 ProSitePatterns Pectinesterase signature 1. 53 72 IPR018040 -
Accr12g01772 324 Gene3D - 25 324 IPR012334 -
Accr12g01772 324 ProSitePatterns Pectinesterase signature 2. 173 182 IPR033131 -
Accr12g01772 324 SUPERFAMILY Pectin lyase-like 26 320 IPR011050 -
Accr12g01772 324 FunFam Pectinesterase 24 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01772 Accr-Chr12 32376037 32380145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01772 27 266 Carbohydrate Esterase AT2G19150 45.455 2.34e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01772 - - qsa:O6P43_026793 437.187