Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01762 ATGGAGTTGAGAAGAAAAGGCTTCGACGGAAGCAAGAAGCTAAGCATTCATAAGTGCAGCAGCTATCGATTATTGTCACAGATGGAAACAGAGAAAGGGTTTTGGTGTCGGTGTTCAGTGTTGTGGCTGTCTCTACTTCTAACGGAAGGAGTTCTGAGTTCTGAACATGCCAATAAATCCTGTACTTCTAGTTGCGGCATTATCACCAACATCTCATATCCATTCCGACTACGAGATGACCCACCCTACTGTGGCCACCACGGATACGAGCTAGCCTGTGAAAACAACATCACTCTCCTTCATTTAAATGATTCTAGCGATGGGAAAGATGGAAGATACCGGGTGATAGGAAGGGATGAGGTGCTAGGAACATACCGAGTGATGGGAATAAACTACAACAACTACACAATCAGACTCGTAGATCCAGGAATTCAGAAGGGCAATTGCTCCTCCCTCCCTCTCTATTCTTTATCCCGATCCAATTTCGACTCTTACTTGGATCTAGAAGATAGCAGTAATCCCTATATCATCACTTGGCTAACCAAGTACTTAAGAGAATATATAAAGTTAACCAAGCAGGTGGGGTACCTGAACTGCAGCAATCCAGTGAGGGACGACACAGCGTATGTGGATACGGCTCCCTGTGTGAATTGGGAATCCAAAGGAGGAGGCCATCTTTATGCTGTGGCTGGTGACTTGTTAGCTCACCAGTTTAAACCTCAGTGTCGTCTGAAATGGGTGACCCTCACAGCCCAGGATTGGAAATCATTGTTGCCTGGTGGAATCAAGTCCTACACTGATATCCACACACTGCTTTCCTCTGGATTTGAGATTTCATGGTTGCCACGAGTTTGTGCTGATCTTAATTGTCTAAATCGCACTTACTGCGGTTTCAGCCCGGAAAGTCAAAGTCTGCAATGCGTGCATTGGACAGATTTACCACAATGTTCTTCCCCCCTTGGAATATATTTTTCCACTTGCCGAAAGCTGCCAACGCTGCGCATATTTGCAGAAGATTTTGCCCATGGAGTTATTGAAGGACTAAACCGGATAGTGAACATGTATGTGGACGACCATACATTCTACGATTTTGGACCATCAAAGGTTTTGATCAAATTAGGAAATGTCATTGGAAGATTTTTGTTCCCATATATTGCAATGAGATTTTTGCTTGGTGTTATCTTCCTATTTATATTGTTGATTTATACATGGCGAAGAAGACACTTATCAATGTATGAAGATATTGAAGATTTTATAAGACTTCATGACCTCATTCCAATAAGATACTCTTATAAGGAATTAAAGGCAATGACTGAAGATTTCAAGAATAAGTTAGGTGAAGGAGGATTTGGCACTGTGTATAAGGGAAAGCTAAGGAGTGGACTTGACGTTGCTATCAAAATGTTAGGTAAATCCAAAGGTAATGGCCAAGAATTTATCAGTGAAGTGGCAACTATAGGGAGGATACACCATTTCAATGTGGTCCATCTTGTAGGCTTTTGTGTGGAAGGGACAAAACGGGCTCTAGTATATGAATTCATGCCGAATGGTTCACTAGATAAATACATATTTTCTAAAGGAAGTATCTCTTTAAGTTATCATAAAATACATGAGATATCTCTAGGAATAGCTCATGGAATTGCTTACCTTCATCATGGTTGTGACATGCAAATATTGCATTTTGATATCAAACCCCACAATATTCTATTAGATGAAAATTTCAACCCGAAGATTTCAGATTTTGGACTAGCAAGATTATATTCTATTGATGATAGCATTGTAACTTTGACTGCGGCAAGAGGGACAATTGGATACATGGCTCCAGAATTGTTCTATAAGAATATTGGGGGAGTGTCTTATAAGGCCGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCTAGTCAAAGAAGGAATTTGAATCCACATGTTGAACATTCAAGTCAACTTTACTTTCCCTTGTGGGTTTATGATCAATTTGATGAAGAAAAAGATATAGAAATGGAAGATTTCAGTGAAGAGGACAAGGATTTAGCAAAGAAGATGTTCATAGTGGCACTATGGTGTATACAATTAAAGCCTGCAGATCGTCCTTCAATGGGTAAAGTAATAGAGATGCTAGAAGCAGATGATGTCGAAAGTCTTGAAATGCCTCCAAAACCTTCTTTATATCCTAATGAAGAAGTTTTGGTGGATGGATCCAGCTCTAGCCACGCAACATCAACCATCTCATTGCATTCTCATAGTTGTCAAGGTGAGTGTATAAGCTAG 2274 0.4024 MELRRKGFDGSKKLSIHKCSSYRLLSQMETEKGFWCRCSVLWLSLLLTEGVLSSEHANKSCTSSCGIITNISYPFRLRDDPPYCGHHGYELACENNITLLHLNDSSDGKDGRYRVIGRDEVLGTYRVMGINYNNYTIRLVDPGIQKGNCSSLPLYSLSRSNFDSYLDLEDSSNPYIITWLTKYLREYIKLTKQVGYLNCSNPVRDDTAYVDTAPCVNWESKGGGHLYAVAGDLLAHQFKPQCRLKWVTLTAQDWKSLLPGGIKSYTDIHTLLSSGFEISWLPRVCADLNCLNRTYCGFSPESQSLQCVHWTDLPQCSSPLGIYFSTCRKLPTLRIFAEDFAHGVIEGLNRIVNMYVDDHTFYDFGPSKVLIKLGNVIGRFLFPYIAMRFLLGVIFLFILLIYTWRRRHLSMYEDIEDFIRLHDLIPIRYSYKELKAMTEDFKNKLGEGGFGTVYKGKLRSGLDVAIKMLGKSKGNGQEFISEVATIGRIHHFNVVHLVGFCVEGTKRALVYEFMPNGSLDKYIFSKGSISLSYHKIHEISLGIAHGIAYLHHGCDMQILHFDIKPHNILLDENFNPKISDFGLARLYSIDDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASQRRNLNPHVEHSSQLYFPLWVYDQFDEEKDIEMEDFSEEDKDLAKKMFIVALWCIQLKPADRPSMGKVIEMLEADDVESLEMPPKPSLYPNEEVLVDGSSSSHATSTISLHSHSCQGECIS 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01762 757 ProSiteProfiles Protein kinase domain profile. 439 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01762 757 Gene3D Phosphorylase Kinase; domain 1 418 513 - -
Accr12g01762 757 FunFam PR5-like receptor kinase 514 720 - -
Accr12g01762 757 SMART serkin_6 439 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01762 757 Gene3D Transferase(Phosphotransferase) domain 1 514 718 - -
Accr12g01762 757 ProSitePatterns Protein kinases ATP-binding region signature. 445 467 IPR017441 GO:0005524
Accr12g01762 757 PANTHER RUST RESISTANCE KINASE LR10-RELATED 412 731 IPR045874 GO:0004672
Accr12g01762 757 Pfam Wall-associated receptor kinase galacturonan-binding 61 141 IPR025287 GO:0030247
Accr12g01762 757 SUPERFAMILY Protein kinase-like (PK-like) 424 709 IPR011009 -
Accr12g01762 757 Pfam Protein tyrosine and serine/threonine kinase 441 708 IPR001245 GO:0004672|GO:0006468
Accr12g01762 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Accr12g01762 757 FunFam serine/threonine-protein kinase PBS1-like 409 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01762 Accr-Chr12 32183415 32190588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01762 379 750 Receptor kinase-like Gene Family AT4G18250 45.000 1.77e-107 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01762 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01762 - - pcin:129321062 827.009