Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01760 ATGACTGAAGATTTCAATAATAAGTTAGGTGAAGGAGGATTTGACACTGTGTATAAGGGAAAGCTAAGGAGTAGACCTGACGTTGCTATCAAAATGTTAGGCAATTCCAAAGCTAATGGCCAAGAATTTATCAATGAAGTGGCAACTATAGGGAGGATACACCATTTCAATGTGGTCCATCTTGTAGGGTTTTGTGTGGAAGGGACAAAACGGGCTCTAGTATATGAATTCATGCCAAATGGTTCACTAGATAAATATATATTTTCTAAAGAAGGAAGTATGTCTTTAAGTTATCAGAAAATACATGAGATATCTCTAAGAATCGCTTATGGAGTTGCTTACCTTCATCATGGTTGTGACATGCAAATATTACATTTTGATATCAAACCCCATAATATTCTACTAGATGAAAATTTCAATCCAAAGATTGCAGATTTTGGGCTAGCAAGATTATATTCTGTTGATGATAGCACCATAGCTCTGACTGCAGCAAGAGGGACAATTGGATACATGGCTCCAGAATTGTTCTATAAGAATATTGGGGGAGTATCTTATAAGGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCTAGTCAAAGAAGGAATTTGAATCCACATGTGGAACATTCAAGTCAACTTTACTTTCCCTTGTGGATTTATGATCAATTTGATGAAGCAAAAGATATAGAAATGGAAGATTTCAGTAAAGAGGACAAGGATTTAGCAAAGAAGATGTTCCTTGTGGCTCTATGCAGGTGTATACAGCTAAAGCCTGCCGATCGCCCTTCAATGGGTAAAGTAATAGAAATGCTAGAAGCCGATGATGTCGAAAGTCTTGAAATGCCTCCAAAGCCTTCTTTGTATCCTAATGAAGAAGTTTTGGTGGATGATGGATCCTACTCTAGCAATACAACATCAACTATCTCAATGCATTCTCATAGTAGTCAAGGTGAGTATATAAGTTAG 975 0.3672 MTEDFNNKLGEGGFDTVYKGKLRSRPDVAIKMLGNSKANGQEFINEVATIGRIHHFNVVHLVGFCVEGTKRALVYEFMPNGSLDKYIFSKEGSMSLSYQKIHEISLRIAYGVAYLHHGCDMQILHFDIKPHNILLDENFNPKIADFGLARLYSVDDSTIALTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASQRRNLNPHVEHSSQLYFPLWIYDQFDEAKDIEMEDFSKEDKDLAKKMFLVALCRCIQLKPADRPSMGKVIEMLEADDVESLEMPPKPSLYPNEEVLVDDGSYSSNTTSTISMHSHSSQGEYIS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01760 324 SUPERFAMILY Protein kinase-like (PK-like) 5 275 IPR011009 -
Accr12g01760 324 Pfam Protein tyrosine and serine/threonine kinase 5 274 IPR001245 GO:0004672|GO:0006468
Accr12g01760 324 SMART serkin_6 3 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01760 324 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Accr12g01760 324 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 298 IPR045874 GO:0004672
Accr12g01760 324 Gene3D Transferase(Phosphotransferase) domain 1 78 284 - -
Accr12g01760 324 PIRSF ILK 3 280 - -
Accr12g01760 324 ProSiteProfiles Protein kinase domain profile. 3 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01760 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Accr12g01760 324 FunFam PR5-like receptor kinase 78 286 - -
Accr12g01760 324 MobiDBLite consensus disorder prediction 299 324 - -
Accr12g01760 324 MobiDBLite consensus disorder prediction 298 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01760 Accr-Chr12 31892604 31893578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01760 1 320 Receptor kinase-like Gene Family AT5G38280 49.847 2.32e-99 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01760 PK_Tyr_Ser-Thr 9.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01760 - - pcin:129321062 465.692