Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01758 ATGACTGAAGGTTTCAAGAATAAGTTAGGTGAAGGAGGATTTGGCACTGTGTATAAGGGAAAGCTAAGGAGTGGACCTGACGTTGCTATCAAAATGTTAGATAAATCCAAAGCTAATGGCCAAGAATTTATCAATGAAGTGGCAACTATAGGGAGGATACACCATTTCAATGTGATCCATCTTGTAGGGTTTTGTGTGGAAGGGACAAAACGGGCTCTGGTATATGAATTCATGCCCAATGGTTCACTAGATAAATATATATTTTCTAAAGTAGGAAGTATCTCTTTAAGTTATCGTAAAATACATGAGATATCTTTGGGAATAGCTTATGGAATTGCTTACCTTCATCATGGTTGTGACATGCAAATATTGCATTTTGATATCAAGCCCCACAATATTCTACTAGATGAAAATTTCAATCCAAAGATTTCAGATTTTGGACTGGCAAGATTATATTCTGTTGATGATAGCATTGTAACTCTGACTGTGGCAAGAGGGACAATCGGATACATGGCTCCAGAATTGTTCTATAAGAATATTGGGGGAGTATCTTATAAGGTTGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCTAGCCAAAGAAGGAATTTGAGTCCACATGTCGAACATTCAAGTCAACTTTACTTTCCCTTGTGGATTTATGATCAATTTGATGAAGAAAAAGATATAGAAATGGAAGATTTCAACAAAGAGGACAAGGATTTAGCAAAGAAGATGTTCATAGTGGCACTATGGTGTATACAACTAAAGCCTGCAGATCGCCCTTCAATGGGTAAAGTAATAGAGATGCTAGAAGCAGATGATGTTGAAAGTCTTGAAATGCCCCCAAAACCTTCTTTATATCCTAATGAAGAAGTTTTGGTGGATGATGAATCTTGGTCTAGCCATGCAACATCAATTATCTCAATGCATTCTCATAGTAGTCAAGGTGAGTGTATAAGCTAG 972 0.3663 MTEGFKNKLGEGGFGTVYKGKLRSGPDVAIKMLDKSKANGQEFINEVATIGRIHHFNVIHLVGFCVEGTKRALVYEFMPNGSLDKYIFSKVGSISLSYRKIHEISLGIAYGIAYLHHGCDMQILHFDIKPHNILLDENFNPKISDFGLARLYSVDDSIVTLTVARGTIGYMAPELFYKNIGGVSYKVDVYSFGMLLMEMASQRRNLSPHVEHSSQLYFPLWIYDQFDEEKDIEMEDFNKEDKDLAKKMFIVALWCIQLKPADRPSMGKVIEMLEADDVESLEMPPKPSLYPNEEVLVDDESWSSHATSIISMHSHSSQGECIS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01758 323 FunFam serine/threonine-protein kinase PBS1-like 1 77 - -
Accr12g01758 323 ProSiteProfiles Protein kinase domain profile. 3 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01758 323 SMART serkin_6 3 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01758 323 Gene3D Transferase(Phosphotransferase) domain 1 78 283 - -
Accr12g01758 323 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Accr12g01758 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Accr12g01758 323 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 296 IPR045874 GO:0004672
Accr12g01758 323 Pfam Protein kinase domain 6 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01758 323 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Accr12g01758 323 SUPERFAMILY Protein kinase-like (PK-like) 6 274 IPR011009 -
Accr12g01758 323 PIRSF ILK 4 279 - -
Accr12g01758 323 FunFam PR5-like receptor kinase 78 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01758 Accr-Chr12 31847192 31848163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01758 1 314 Receptor kinase-like Gene Family AT4G18250 49.226 7.18e-105 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01758 Pkinase 8.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01758 - - pcin:129321062 489.189