Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01718 ATGGCTTCTCCGGGTGGTGGTGTTTCTTCTGGGGCTTCAGATATGGACCAGAGGAAGAGGAAGAGGATGGAGTCGAACCGGGAGTCAGCTCGGCGATCAAGGATGAAGAAACAGCAGCATCTGGATGAACTGGCAAGGCAAGTGGGAGAGCTGATGAAGGAGAATGAAGAAATAATGAAGAAGCTGAGCATCACCAACCAACTTTATGGAAACATGGAGGCTCAAAACGCTGTGTTAAGGACTCAAATGGCTGAGTTGACCAACCGACTGGACTCTCTCAATGAGATCATAAGCTTCATAAACTCATCAACCAATAATCATAATTATCCTCTCATGGATGATGAGTTTAATTACAATAATAATGACCCAGAAATGATCTCAGATTGTGGCTTCTACAACCCTTGGATTAATCAACCGATCATGGCTTCTGGCAATAACAATATCATGTATTGA 453 0.4349 MASPGGGVSSGASDMDQRKRKRMESNRESARRSRMKKQQHLDELARQVGELMKENEEIMKKLSITNQLYGNMEAQNAVLRTQMAELTNRLDSLNEIISFINSSTNNHNYPLMDDEFNYNNNDPEMISDCGFYNPWINQPIMASGNNNIMY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01718 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 16 79 IPR004827 GO:0003700|GO:0006355
Accr12g01718 150 PANTHER BZIP TRANSCRIPTION FACTOR 44 7 147 - -
Accr12g01718 150 FunFam BZIP transcription factor 16 67 - -
Accr12g01718 150 MobiDBLite consensus disorder prediction 14 41 - -
Accr12g01718 150 SMART brlzneu 14 78 IPR004827 GO:0003700|GO:0006355
Accr12g01718 150 Pfam bZIP transcription factor 18 76 IPR004827 GO:0003700|GO:0006355
Accr12g01718 150 Gene3D - 16 72 - -
Accr12g01718 150 Coils Coil 27 61 - -
Accr12g01718 150 MobiDBLite consensus disorder prediction 1 41 - -
Accr12g01718 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 21 36 IPR004827 GO:0003700|GO:0006355
Accr12g01718 150 SUPERFAMILY Leucine zipper domain 18 72 IPR046347 GO:0003700|GO:0006355
Accr12g01718 150 CDD bZIP_plant_GBF1 19 69 IPR045314 GO:0003700|GO:0006355
Accr12g01718 150 Coils Coil 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01718 Accr-Chr12 30317505 30317957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01718 13 150 bZIP Transcription Factor Family AT4G34590 48.649 8.09e-33 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr12g01718 bZIP_1 5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01718 K25786 - csav:115714043 145.591