Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01697 ATGGCGTGCAATGGATTATCAACAATCTCAGCAAGTGATTCTCGCTTCTTCAACCTTTCAACCCCACCAATTTCTTCCCTCAAATCCTTGAAATTTTCCTCGATTCGAGTTCCGTCGTCTCGTTCCGCTTCATTTAAACCAAGAGCTCTGTCCGTCGCCGAGCCTTACTTCTCGTCGCCGTTGTCCTCTGAGCCCTCTAAATTAAGCTTCTACGAGCTTCTCGGTATTCCTGAATCCGGATCCTTACTCGACATCAAGCAAGCGTACAAGCAGCTCGCCCGCAAGTACCACCCGGATGTGTCTCCGCCGGATCGGGCCGATGAATCCACCAAGATATTCATTCTGGTTCGTGAAGCCTACGAGACCTTGTCTGATCCTCAACGGAGAGCGATGTACGATAGAGCCATCCACTTGGGCTACTCTACTGGTGGATACGACGATGAGATGGCTGAAATAAAGAAAGGATGGAGAGCTTGTTGGGAGGTTCAGCTAGCAGGGCTGAATTACAGAAGAACTTACAAGTATGGCGATAGATCTCAGTCATGGGCTTCTCGAGTCCGCCGGACGCATAATGAAGCTGGATTTTCCAAATAG 594 0.4933 MACNGLSTISASDSRFFNLSTPPISSLKSLKFSSIRVPSSRSASFKPRALSVAEPYFSSPLSSEPSKLSFYELLGIPESGSLLDIKQAYKQLARKYHPDVSPPDRADESTKIFILVREAYETLSDPQRRAMYDRAIHLGYSTGGYDDEMAEIKKGWRACWEVQLAGLNYRRTYKYGDRSQSWASRVRRTHNEAGFSK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01697 197 Pfam DnaJ domain 70 133 IPR001623 -
Accr12g01697 197 CDD DnaJ 70 125 IPR001623 -
Accr12g01697 197 Gene3D DnaJ domain 61 150 IPR036869 -
Accr12g01697 197 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 61 192 - -
Accr12g01697 197 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Accr12g01697 197 SMART dnaj_3 68 128 IPR001623 -
Accr12g01697 197 PRINTS DnaJ domain signature 71 89 IPR001623 -
Accr12g01697 197 PRINTS DnaJ domain signature 89 104 IPR001623 -
Accr12g01697 197 PRINTS DnaJ domain signature 128 147 IPR001623 -
Accr12g01697 197 PRINTS DnaJ domain signature 108 128 IPR001623 -
Accr12g01697 197 SUPERFAMILY Chaperone J-domain 67 156 IPR036869 -
Accr12g01697 197 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01697 Accr-Chr12 28905412 28907066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01697 62 133 C2H2 Transcription Factor Family AT1G74250 40.000 7.25e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01697 - - pcin:129320802 215.312