Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01683 ATGGCATCTGATTCGAATGGACCTGCATCCGATAACACGCTCAAGGCTATCCTTTACCAGCGTGGTTCGCTTCGGCTTCTTGATCAGAGAAAGCTCCCTCTAGAAAGTGTTTACTTGGACATTCAGAATTCAACTGATGGCTGGAATGCCATAAAGGATATGGTGGTCCGTGGAGCACCTGCTATTGCTATCGCAGCAGCACTTTCTCTGGCTGTTGAAGTTTTCAATCTAGAGGCATTTGATGGGTCACCCGGTGATGCAGCTTCCTTCCTTGGACAGAAATTAGATTATCTTGTCTCAAGTCGGCCAACTGCAGTGAACCTTTCAGATGCTGCAACCAAACTCAAAGAAATTATATCTAAGGCTGTTGCTTCTACTACGGAGGCCAAGTGTGTTTTCCAGGTGTATATAGAAGCTGCTGAGATTATGCTCGAGGATGATGTTGCCTCAAATAGAGCAATTGGTTCTTATGGAGCTAGTATTATTCAACAACAAACAGGGAAAAGAAAGCTTTCTGTTTTGACCCATTGCAACACAGGAAGTCTTGCCACTGCTGGATATGGGACTGCTCTGGGTGTAATTCGTGCACTTCATAGTGAAGGGGTTTTACAAAGGGCCTATTGCACAGAAACACGCCCATTCAGTCAGGGATCTAGGCTCACGGCCTATGAGTTGGTGCATGAACACATACCTGGAACTCTTATAGTAGATTCTGCTGCAGCTGCACTAATGAAAGCTGGACGAGTAGATGCTGTTGTTGTTGGGGCAGACCGTGTTGCATCAAATGGTGACACAGCCAACAAAATTGGAACCTATAGTGTTGCCTTATGCGCCATGTTTCATAATATACCCTTTTATGTGGCTGCTCCTTTGACTTCCATTGATCTATCACTTTCTTCCGGACAAGAAATTGTCATTGAGGAGAGATCTCCCAAGGAATTGTTGAATGGACGTGGAGGACTTGGAGAGGCTGTTGCAGCCCCAGGAATTTCTGTGTGGAACCCTGCTTTTGATGTCACACCGGCTAGCCTGATTTCCGGTATCATCACAGAGAAGGGTGTCATTACCAAGACAAGTGATGATGATGATACATTCGACATAAAGGCTTTTGCACAGAAGACTGGTCATGCCAGCAGTTGA 1140 0.4553 MASDSNGPASDNTLKAILYQRGSLRLLDQRKLPLESVYLDIQNSTDGWNAIKDMVVRGAPAIAIAAALSLAVEVFNLEAFDGSPGDAASFLGQKLDYLVSSRPTAVNLSDAATKLKEIISKAVASTTEAKCVFQVYIEAAEIMLEDDVASNRAIGSYGASIIQQQTGKRKLSVLTHCNTGSLATAGYGTALGVIRALHSEGVLQRAYCTETRPFSQGSRLTAYELVHEHIPGTLIVDSAAAALMKAGRVDAVVVGADRVASNGDTANKIGTYSVALCAMFHNIPFYVAAPLTSIDLSLSSGQEIVIEERSPKELLNGRGGLGEAVAAPGISVWNPAFDVTPASLISGIITEKGVITKTSDDDDTFDIKAFAQKTGHASS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01683 379 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 372 - -
Accr12g01683 379 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 42 357 IPR011559 GO:0044249
Accr12g01683 379 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 15 357 IPR005251 -
Accr12g01683 379 Gene3D - 204 368 IPR042529 -
Accr12g01683 379 SUPERFAMILY NagB/RpiA/CoA transferase-like 12 359 IPR037171 -
Accr12g01683 379 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 362 IPR005251 -
Accr12g01683 379 FunFam Methylthioribose-1-phosphate isomerase 12 203 - -
Accr12g01683 379 Pfam Initiation factor 2 subunit family 56 356 IPR000649 GO:0044237
Accr12g01683 379 Gene3D - 12 203 IPR027363 -
Accr12g01683 379 FunFam Methylthioribose-1-phosphate isomerase 169 368 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01683 53 378 Eukaryotic Initiation Factors Gene Family AT2G05830 77.134 5.22e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01683 K08963 - gmx:100799311 572.007