Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01675 ATGATTTTAACACATTCTGGTGGAGCAATGCAATTTCTTAAATTTTACTCCACTCTTTCATATTCTCTGAATAATTTATCCTCTATCACTTCTAGATCCTTTGTTTCTCTGCCCTCCACTGTCTCTTCAACTAAATCTCCAAAGGAACGCATTATTGTCGTTGATTACCTCAGTTCAAACTTCAAATTCTCAAAAACTCTATCCCTCTATGTCTCAGAACGAGTTTTTCATGCTAGGTGCCCTCAACAACCCTTCACCGTGCTGAATTATTTTCAACAGATTGGATTCACTGAAGCTCATATTCAATTGATGGTTTGTCGAACACCCCAAATACTGTTTTCTGACATTAATAAAACTCTGAAGCCAAAAGTTGAGTACTTTCAGCGACTGGGCTTTGATATTTCTGAGCTGGGAAAGTTTCTATCCTCAAAGTCAGCTCTTTTGACTTCGAGTTTGAACAAAACCTTGGCCCCCTCTGTGGAGACTATTAGGAACATTGGTTGCAATGAGAAAGATCTTGTTAAACTGTTACAAAGAATTGGCTGGATACTCCCAAGTCACAAAAAAATTGTGCGCAGTGTTGCCTTCTTTCAGAGTTATGGGATCATTGGGTCTCAGCTTTTATATCTACTCAAAAGACAGCCTCTGCTTTTCACCAAACAGGAGTCTCTGCTTCAAAACCTTGTTTCACGGGCTGTAAACTTGGGCTTTCATGTAAATTCAAGAATGTTGGTGCATGCAATCGTTGTAGTCCATGGTTTGAGCACTGAAGCATTTGAAAGAAGATTGAAGTTAAATCAGATTTATGGGTTTTCCAAAGAGGAGAGCTTACAAATGTTTAGAAGAGCTCCGTACTTGCTTCGTTCTGCTGAGGAGAGAGTAAAGTTTGGATTTGAGTTCTTCCTGAATGAAGTTATGCTACCCAAGTCAGTGCTTGTTCAAAGACCTATGATCTTGTTGTATAGCATGGAAGATAGGGTGATTCCTCGGTACAGAATTTTGCAGCTGTTAATCTCTGAAAATTTACTCAAGAAGAATCCAAGTTTCGTTGAAATGTTAGAGATGCGTGAGGATACATTCTTGAAGAAGTATATTTTGAAGTTCAGACATAATGCAGAGACTTTATTAATGGCATACGAAGTACACCGTCTTGAAGGTTTTTCTTGA 1167 0.3856 MILTHSGGAMQFLKFYSTLSYSLNNLSSITSRSFVSLPSTVSSTKSPKERIIVVDYLSSNFKFSKTLSLYVSERVFHARCPQQPFTVLNYFQQIGFTEAHIQLMVCRTPQILFSDINKTLKPKVEYFQRLGFDISELGKFLSSKSALLTSSLNKTLAPSVETIRNIGCNEKDLVKLLQRIGWILPSHKKIVRSVAFFQSYGIIGSQLLYLLKRQPLLFTKQESLLQNLVSRAVNLGFHVNSRMLVHAIVVVHGLSTEAFERRLKLNQIYGFSKEESLQMFRRAPYLLRSAEERVKFGFEFFLNEVMLPKSVLVQRPMILLYSMEDRVIPRYRILQLLISENLLKKNPSFVEMLEMREDTFLKKYILKFRHNAETLLMAYEVHRLEGFS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01675 388 FunFam Mitochondrial transcription termination factor-like 152 372 - -
Accr12g01675 388 Pfam mTERF 88 237 IPR003690 GO:0003690|GO:0006355
Accr12g01675 388 Pfam mTERF 187 361 IPR003690 GO:0003690|GO:0006355
Accr12g01675 388 Gene3D Transcription termination factor 3, mitochondrial 152 370 IPR038538 -
Accr12g01675 388 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Accr12g01675 388 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Accr12g01675 388 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Accr12g01675 388 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Accr12g01675 388 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Accr12g01675 388 PANTHER CGI-12 PROTEIN-RELATED 50 366 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01675 Accr-Chr12 27738572 27739738 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr12g01675 mTERF 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01675 K15031 - qsa:O6P43_021347 329.331