LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr12g01674	ATGATCAGGTGCCCTCAACAACCCTTCACCGTGCTGAATTATTTTCAACAGATTGGATTCACTGAAGCTCATATTCAATTGATGGTTTGTCGAACACCCCAAATACTGTTTTCTGACATTAATAAAACTCTGAAGCCAAAAGTTGAGTACTTTCAGCGACTGGGCTTTGATATTTCTGAGCTGGGAAAGTTTCTATCCTCAAAGTCAGCTCTTTTGACTTCGAGTTTGAACAAAACCTTGGCCCCCTCTGTGGAGACTATTAGGAACATTGGTTGCAATGAGAAAGATCTTGTTAAACTGTTACAAAGAATTGGCTGGATACTCCCAAGTCACAAAAAAATTGTGCGCAGTGTTGCCTTCTTTCAGAGTTATGGGATCATTGGGTCTCAGCTTTTATATCTACTCAAAAGACAGCCTCTGCTTTTCACCAAACAGGAGTCTCTGCTTCAAAACCTTGTTTCACGGGCTGTAAACTTGGGCTTTCATGTAAATTCAAGAATGTTGGTGCATGCAATCGTTGTAGTCCATGGTTTGAGCACTGAAGCATTTGAAAGAAGATTGAAGTTAAATCAGATTTATGGGTTTTCCAAAGAGGAGAGCTTACAAATGTTTAGAAGAGCTCCGTACTTGCTTCGTTCTGCTGAGGAGAGAGTAAAGTTTGGATTTGAGTTCTTCCTGAATGAAGTTATGCTACCCAAGTCAGTGCTTGTTCAAAGACCTATGATCTTGTTGTATAGCATGGAAGATAGGGTGATTCCTCGGTACAGAATTTTGCAGCTGTTAATCTCTGAAAATTTACTCAAGAAGAATCCAAGTTTCGTTGAAATGTTAGAGATGCGTGAGGATACATTCTTGAAGAAGTATATTTTGAAGTTCAGACATAATGCAGAGACTTTATTAATGGCATACGAAGTACACCGTCTTGAAGGTTTTTCTTGA	939	0.393	MIRCPQQPFTVLNYFQQIGFTEAHIQLMVCRTPQILFSDINKTLKPKVEYFQRLGFDISELGKFLSSKSALLTSSLNKTLAPSVETIRNIGCNEKDLVKLLQRIGWILPSHKKIVRSVAFFQSYGIIGSQLLYLLKRQPLLFTKQESLLQNLVSRAVNLGFHVNSRMLVHAIVVVHGLSTEAFERRLKLNQIYGFSKEESLQMFRRAPYLLRSAEERVKFGFEFFLNEVMLPKSVLVQRPMILLYSMEDRVIPRYRILQLLISENLLKKNPSFVEMLEMREDTFLKKYILKFRHNAETLLMAYEVHRLEGFS	312

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr12g01674	312	SMART	mt_12	62	93	IPR003690	GO:0003690\|GO:0006355
	Accr12g01674	312	SMART	mt_12	201	232	IPR003690	GO:0003690\|GO:0006355
	Accr12g01674	312	SMART	mt_12	233	265	IPR003690	GO:0003690\|GO:0006355
	Accr12g01674	312	SMART	mt_12	132	162	IPR003690	GO:0003690\|GO:0006355
	Accr12g01674	312	SMART	mt_12	26	57	IPR003690	GO:0003690\|GO:0006355
	Accr12g01674	312	Gene3D	Transcription termination factor 3, mitochondrial	80	294	IPR038538	-
	Accr12g01674	312	Pfam	mTERF	111	285	IPR003690	GO:0003690\|GO:0006355
	Accr12g01674	312	Pfam	mTERF	12	162	IPR003690	GO:0003690\|GO:0006355
	Accr12g01674	312	PANTHER	CGI-12 PROTEIN-RELATED	7	290	IPR003690	GO:0003690\|GO:0006355
	Accr12g01674	312	FunFam	Mitochondrial transcription termination factor-like	76	296	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr12g01674	Accr-Chr12	27738475	27739738	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	mTERF	Accr12g01674		mTERF	1e-16	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr12g01674	K15031		-	qsa:O6P43_021347	314.309