Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01668 ATGCAATCTCTGTCTGAAACTGTTGGTAGTCTGAAGGAGAAAATTGCTGGGGAGATCCAGCTGCCTGCTAACAAACAGAAATTGAGTGGAAAACCTGGCTTTCTCAAGGATAATATGTCACTTGCTTATTACAATATTGCAGGAGGGGAGGTACTCTCTCTCACATTAAGAGAGCGTGGTGGTAGGAGGAGATGA 195 0.441 MQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAYYNIAGGEVLSLTLRERGGRRR 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01668 64 ProSiteProfiles Ubiquitin domain profile. 5 61 IPR000626 GO:0005515
Accr12g01668 64 SUPERFAMILY Ubiquitin-like 4 62 IPR029071 -
Accr12g01668 64 Pfam Ubiquitin family 4 59 IPR000626 GO:0005515
Accr12g01668 64 CDD Ubl_SF3a120 4 57 IPR035563 -
Accr12g01668 64 Gene3D - 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01668 Accr-Chr12 27441041 27441235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01668 5 61 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.596 5.66e-06 38.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01668 K12825 - gmx:100797261 117.472