Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01666 ATGGTCAGATTTCAGTTTCTGCGTTCACACTTATGTCTGCTAGTTTCGGTTTCTTGTGTGCTTATTGGTTGTTTGGGAGATAATGAGATAGCTGCACAATTGAACGATGATGTTCTTGGTCTGATAGTGTTTAAATCCGACCTTTATGACCCTTCTGCTCATCTTGATTCATGGAATGAGGATGATGGGAGTGCTTGCTCATGGCGGTTCGTGCAGTGTAATCCAGTGACTGGGAAAGTTTCCGAGGTCTCACTTGATGGATTAGGCTTATCTGGGAAAATAGGAAAAGGTCTTGAGAAGTTGCAGCATCTCAAGGTGTTGTCACTGTCTCATAACAACTTAACTGGAAGTATTAGTCCTTCACTTTCTCTTTCAAACACTCTTCAAAGCCTAAACCTCAGTCACAATAGCTTATCTGGTTCCATTCCCAGTTCTTTTGTGAATATGGATTCAATGAAGTCTCTTGATCTATCAGAGAATTCATTCTCAGGACAAGTCCCAGAAAGCATGTTTCAAAACTGTTCTTCCCTTCATCATCTTTCTCTGGCTAGGAACATGTTTGAAGGATCAATTCCCAGCACAATAACTAGATGTTCCTTATTGAACAGCCTTGATCTTTCGAAAAACCGGTTCGGTGGTAGTGTGGATTTCAGTGGGATTTGGTCTTTGACTAGGCTTAGGACTTTGGATTTGTCAAATAATGCCTTATCTGGAAATTTGCCTCTTGGGGTATCAGCCATACATAACTTGAAAGAGATTCTGCTACAAGGTAATCACTTTTCAGGACCATTACCTTCTGATATTGGACTGTGCTTGCATTTGAATAGGTTGGATTTTAGTAATAATATGTTCAGTGAAGCACTTCCGAAGTCACTTGGGAGACTTAACTTTTTGAACTCCTTCAAGGCATCAAATAACTTTCTAACCAATGAAATCCCAGAGTGGATTGGTAAAATGGCAAGTCTGGAATACCTTGATCTCTCAGGCAATCAGTTAACTGGGAAAATCCCGGATTCGATCAGTGATTTGAGATCGCTGAGTTATCTTGGTCTCTCGGATAACAAGCTTGTGGGAAACATTCCATCATCATTGGTTTCATGTACTAAGTTATCATCCATTCATCTCAGAGGTAATGGTTTCAATGGCAGCATACCAGAGGGACTGTTTGGCATAGAATCATTAGAGGTAGTAGACCTGTCTCGTAATGGGCTAAAGGGCGAAATCCCTGCAGAAATTATTCATGCTTTTAAACTGAAATATTTGAATCTATCTTGGAATGATTTTAACTCCCAAATGCCCCCAGAGTTGGGTATGCTTCAGAATCTGACAGTTTTAGATCTTCTGAGCAATTCACTATATGGCTCTATTCCAGAGGATTTATGTGATTCAGGCAATTTAGCTATTCTTCAACTGGATGGAAACTCATTAAATGGTGCTATCCCAGATGAGATTGGAAATTGCACTTCTCTTTACTTGCTGAGCTTGTGTCACAATAACTTGAGTGGTTCAATTCCCAAGTCCGTGTCAAAACTTAAAGAGCTCAAAGTTCTGAAATTGGAATTCAATGAACTGAGTGGAGAGATACCACAGGAGCTTGGGTTGCTGCAGAATCTTCTTGCTGTGAATATATCATACAACAGACTCACCGGCAGGCTTCCTAGTGGTAGCATATTTCAAAACTTAGACGAAAGTTCCCTAGAAGGAAACTTTGGCCTTTGTTCACCCTTACTGAAAGGGCCATGTAAGATGGATGTGCCCAAGCCACTGGTTCTTGACCCGAATGCCTATAACAACCAAATGGGCAGGCCGAGAAATGAATCGTCCATGGGTACCTCAGGCATCACCCGTCGCCACCGGTTCCTGAGTGTTTCTGTTATTATCGCAATTTCTGCTGCTTTCTTGATCTTATTGGGTGTCATTGCTATTAGCCTTTTGAATGCTTCTGTGAGGAGAAGGCTGACATTTGTTGATAATGCTTTGGAAAGCATGTGTTCATCATCTTCAAGATCAGGAAGTCCACCCACAGGAAAGCTCATTCTGTTTGATTCAGGGCGGTCCTCGCTTGATTCAATCAGCAACCCGGAAAACTTGCTGAACAAGGCATCTGAGATAGGAGACGGAGTGTTTGGAACAGTTCACAAGGTTCCTTTGGGATCACAAGGTAGAATGGTGGCAATTAAGAGGCTTGTGACTTCAAACATAGTCCAATACCCTGAAGACTTTGATAGGGAAGTAAGAATCTTAGGGAAGGCAAGGCACCCTAATCTAATAGCACTGAAAGGATACTATTGGACTCCTCAACTGCAACTTTTGGTCGCGGAATATGCACCAAACGGTAGCTTGCAATCCAAGCTACACGACCGGCTTCCTTCATCTCCACCTCTTTCATGGGCCGATAGGTTCAAAATTTTGCTAGGAACAGCAAAAGGCCTAGCTCACTTACACCATTCATTCCGCCCGCCGATCATTCACTACAACTTGAAGCCAAGCAACATTCTACTCGACGAGAACAACAATCCAAAGATCTCAGATTTTGGATTGGCCCGGCTTCTGACAAAGCTAGAAAGGCATGTGATGAGCAACAGGTTTCAGAGCGCACTAGGGTACGTAGCGCCGGAATTGGCATGCCAGAGCTTGAGGGTGAATGAGAAGTGTGATATCTATGGCTTCGGGGTGATGATTCTCGAGGTTGTGACAGGAAGGAGGCCGGTGGAATACGGAGAAGACAATGTTGTGATACTGAAAGACCATGTGAGGGTGATGCTTGAGCAAGGAAATGTGTTGGAATGTGTGGATCCAAGCATGAGTGAGTATCCTGAAGATGAGGTTCTCCCAGTTCTGAAGCTTGCATTGGTGTGCACCTCACAGATACCTTCAAGCAGGCCTTCCATGGCAGAAGTAGTTCAAATTCTGCAGGTTATCAAAACTCCTGTTCCTCACAGAATGGAAATGTTTTAG 2958 0.4297 MVRFQFLRSHLCLLVSVSCVLIGCLGDNEIAAQLNDDVLGLIVFKSDLYDPSAHLDSWNEDDGSACSWRFVQCNPVTGKVSEVSLDGLGLSGKIGKGLEKLQHLKVLSLSHNNLTGSISPSLSLSNTLQSLNLSHNSLSGSIPSSFVNMDSMKSLDLSENSFSGQVPESMFQNCSSLHHLSLARNMFEGSIPSTITRCSLLNSLDLSKNRFGGSVDFSGIWSLTRLRTLDLSNNALSGNLPLGVSAIHNLKEILLQGNHFSGPLPSDIGLCLHLNRLDFSNNMFSEALPKSLGRLNFLNSFKASNNFLTNEIPEWIGKMASLEYLDLSGNQLTGKIPDSISDLRSLSYLGLSDNKLVGNIPSSLVSCTKLSSIHLRGNGFNGSIPEGLFGIESLEVVDLSRNGLKGEIPAEIIHAFKLKYLNLSWNDFNSQMPPELGMLQNLTVLDLLSNSLYGSIPEDLCDSGNLAILQLDGNSLNGAIPDEIGNCTSLYLLSLCHNNLSGSIPKSVSKLKELKVLKLEFNELSGEIPQELGLLQNLLAVNISYNRLTGRLPSGSIFQNLDESSLEGNFGLCSPLLKGPCKMDVPKPLVLDPNAYNNQMGRPRNESSMGTSGITRRHRFLSVSVIIAISAAFLILLGVIAISLLNASVRRRLTFVDNALESMCSSSSRSGSPPTGKLILFDSGRSSLDSISNPENLLNKASEIGDGVFGTVHKVPLGSQGRMVAIKRLVTSNIVQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVAEYAPNGSLQSKLHDRLPSSPPLSWADRFKILLGTAKGLAHLHHSFRPPIIHYNLKPSNILLDENNNPKISDFGLARLLTKLERHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILEVVTGRRPVEYGEDNVVILKDHVRVMLEQGNVLECVDPSMSEYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPVPHRMEMF 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01666 985 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 195 289 - -
Accr12g01666 985 ProSitePatterns Protein kinases ATP-binding region signature. 704 727 IPR017441 GO:0005524
Accr12g01666 985 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 34 194 - -
Accr12g01666 985 Pfam Protein kinase domain 700 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01666 985 Pfam Leucine Rich repeat 416 429 IPR001611 GO:0005515
Accr12g01666 985 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Accr12g01666 985 FunFam Inactive leucine-rich repeat receptor-like protein kinase 392 584 - -
Accr12g01666 985 ProSiteProfiles Protein kinase domain profile. 698 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01666 985 SUPERFAMILY Protein kinase-like (PK-like) 698 980 IPR011009 -
Accr12g01666 985 Pfam Leucine rich repeat 304 356 IPR001611 GO:0005515
Accr12g01666 985 Pfam Leucine rich repeat 103 161 IPR001611 GO:0005515
Accr12g01666 985 ProSiteProfiles Leucine-rich repeat profile. 321 343 IPR001611 GO:0005515
Accr12g01666 985 Gene3D Ribonuclease Inhibitor 293 584 IPR032675 -
Accr12g01666 985 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 776 980 - -
Accr12g01666 985 FunFam Leucine-rich repeat receptor protein kinase EMS1 312 391 - -
Accr12g01666 985 Gene3D Transferase(Phosphotransferase) domain 1 776 982 - -
Accr12g01666 985 SUPERFAMILY RNI-like 218 553 - -
Accr12g01666 985 ProSiteProfiles Leucine-rich repeat profile. 103 125 IPR001611 GO:0005515
Accr12g01666 985 SMART LRR_typ_2 223 247 IPR003591 -
Accr12g01666 985 SMART LRR_typ_2 319 342 IPR003591 -
Accr12g01666 985 SMART LRR_typ_2 343 367 IPR003591 -
Accr12g01666 985 SMART LRR_typ_2 439 463 IPR003591 -
Accr12g01666 985 SMART LRR_typ_2 149 173 IPR003591 -
Accr12g01666 985 SMART LRR_typ_2 101 125 IPR003591 -
Accr12g01666 985 SMART LRR_typ_2 511 535 IPR003591 -
Accr12g01666 985 SMART LRR_typ_2 391 415 IPR003591 -
Accr12g01666 985 Gene3D Phosphorylase Kinase; domain 1 685 775 - -
Accr12g01666 985 Gene3D Ribonuclease Inhibitor 33 184 IPR032675 -
Accr12g01666 985 Gene3D Ribonuclease Inhibitor 185 290 IPR032675 -
Accr12g01666 985 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 290 410 IPR046959 -
Accr12g01666 985 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 692 775 - -
Accr12g01666 985 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Accr12g01666 985 SUPERFAMILY L domain-like 81 289 - -
Accr12g01666 985 CDD STKc_IRAK 704 972 - -
Accr12g01666 985 PRINTS Leucine-rich repeat signature 128 141 - -
Accr12g01666 985 PRINTS Leucine-rich repeat signature 223 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01666 Accr-Chr12 27365192 27368363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01666 26 982 Receptor kinase-like Gene Family AT3G28040 63.939 0.0 1219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Accr12g01666 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01666 - - gmx:100795810 1469.14