Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01593 ATGTTTAAAACAGTAGCATCTGGACTTTCAATTTTTTTCCTCCTCCAATGTGTTTCTGCAACAGATGATCAATTTCCGAGATGTAACTGTGATGATGAGGCCAGCTTGGGGACTATTGAGAGTATTGTGGGGTGCCAGAGAGTCAGTGATTTGTTGATTGCTGTGGCCTACTTCTCTATACCCATTGAGTTGCTTTGTTTTATCAGTTGTGCGAATGTCCCATTCAAATGGGTTCTTGCTCAGTTCATTGCCTTCATTGTACTATGTGGGTTGACACATATGCTAAATGCATGGACTTATGGTCCTCACTCTTTCCAAGTGATGGTGGCACTTACAGTATTCAAAACTCTTACGGCTTTGGTATCGTGTGCCACTGCTATTACTCTCATGACTCTTATCCCTTTGCTTCTTAAAGTGAAGGTCAGAGAATTAATGCTGAAGAAAAAGACCTCTGAACTTGGGCGAGAGGTTGGTATTATTATGAGACAGAAGGAAGCTGCAAGACATGTAAGGATGCTCACTCAAGAGATTCGCAAGTCACTTGATAGGCATAATATTTTGTACACCACCTTGGTGGAACTGTCTGAAACACTTGGTTTGCAAAATTGTGCAGTCTGGATGCCTAATTTTGATAAAACAGAGATGAACCTCACTCATGAATTGAATGGGAGGAATCCTAATCTTTCTATACCCATTACGGATCCAGATGTTCTGAGAATCAAGGCAAGTGATGAAGTAAATATTCTTAGCCCTGCCTCAGCACTTGCTGCTGCTAGTAGTGGAGATTCTTCTGAGGCAGGACCTGTGGCTGCAATTCGGATGCCAATGCTTCGGATTTGCAATTTCAAAGGTGGAACACCTGAGGTAAAGCAGGCATGTTATGCAATATTGGTTCTGGTTCTTCCTGGTGGAGAGCCAAGATCTTGGAGCAATCAGGAGCTGGAAATAGTTAAAACAGTTGCTGATCAGGTTGCTGTAGCCCTGTCTCATGCTGCAATTCTTGAAGAGTCCCAACTCATGAGAGAGAAGTTGGAGGAGCAAAATCGAATTCTACAACAGGCTCAAAGGAATGCTCTGATGGCGAGTCAGGCAAGAAACTTATCTCAGAAGGTCATGAGTGATGGAATGAGGAGACCGATGCACTCAATTTTGGGTTTGCTTTCAATTATGCAAGATGAGAATTTGAGAAGCGAACAGAAACTCATTGTGGATTCGATGCTGAGAACCAGCAATGTCCTATCAAACTGGATAAATGATGCCATGAACATTTCAGCCAAGGATGATGGAGGATTTCCATTGGAGATGAGATCTTTTGGGTTACATGCCATGATAAAAGAAGCAGCATGCCTTGCCAAGTGTCTTTGCATTTACAGGGGCTTTGGTTTTAAAATTGAGTGTGAGAAGTCTTTGCCTGACGATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTCTACATATGGTTGGGAATTTATTGGACGGTAATCACCGGGGAGGGATGCTTGTACTTCGTGTTCTTGCAGAAAGAGGAAGTCAGGAAAGAAATGACCATGGGTGGACAACCTGGAGACCAAGCTCATCTAGTGGGGATGTACATATTAGATTTGAGATAGGGATAACTAGAGGCAACTATGAATTGGAGAGTTCACTTTCTTTAGGAGTTCATGGTAGGAAATATTCTAGTTGTAGAGATGAAGTCAGATTGAGCTTCAGCATTTGCAAGAGGATAGTTCAGTTGATGCAAGGGAACATATGGTTTGTTCCAAACACCTTAGGTTATCCTCAGACCATGGCCCTTGTTCTTCGTTTTCATCTACGACAGTCTGTTTCCATATTCATCTCTGAGCCTGGTGATTCCTCTGAGCGCACAGATTCTGATTCTCTGCTCAGAGGCCTGCAAGTCTTGTTGGTTGACAATGATGATGTAAATAGAGCTGTGACACAAAAGTTGCTTCAGAAGCTAGGTTGCGTCGTAACTTCAGTTTCTTCAGGATTCGAATGCCTTGCTGTCATTGCACCTGCTGGATCGTCTATTCAAGTCATTCTTTTGGATCTTCATATGCCTGAGTTAGATGGCTTTGAAGTAGCAACAAGGATTCGGAAATTTAGAAGCCAAAGTTGGCCAATGATTGTTGCCTTGACTGCAAGTGCCGATGAAGATTTGCATGAAAGATGTATGCAAATCGGTATCAGTGGAATTATAAGAAAACCTGTTATGTTGCAGGAAATTGCCAGCGAACTTCGGAGGATCCTGATGCATGCACAGAAACGAAGTCCCATGAGAGGAGAGAGGTTGTAA 2301 0.4276 MFKTVASGLSIFFLLQCVSATDDQFPRCNCDDEASLGTIESIVGCQRVSDLLIAVAYFSIPIELLCFISCANVPFKWVLAQFIAFIVLCGLTHMLNAWTYGPHSFQVMVALTVFKTLTALVSCATAITLMTLIPLLLKVKVRELMLKKKTSELGREVGIIMRQKEAARHVRMLTQEIRKSLDRHNILYTTLVELSETLGLQNCAVWMPNFDKTEMNLTHELNGRNPNLSIPITDPDVLRIKASDEVNILSPASALAAASSGDSSEAGPVAAIRMPMLRICNFKGGTPEVKQACYAILVLVLPGGEPRSWSNQELEIVKTVADQVAVALSHAAILEESQLMREKLEEQNRILQQAQRNALMASQARNLSQKVMSDGMRRPMHSILGLLSIMQDENLRSEQKLIVDSMLRTSNVLSNWINDAMNISAKDDGGFPLEMRSFGLHAMIKEAACLAKCLCIYRGFGFKIECEKSLPDDVMGDERRVFQVILHMVGNLLDGNHRGGMLVLRVLAERGSQERNDHGWTTWRPSSSSGDVHIRFEIGITRGNYELESSLSLGVHGRKYSSCRDEVRLSFSICKRIVQLMQGNIWFVPNTLGYPQTMALVLRFHLRQSVSIFISEPGDSSERTDSDSLLRGLQVLLVDNDDVNRAVTQKLLQKLGCVVTSVSSGFECLAVIAPAGSSIQVILLDLHMPELDGFEVATRIRKFRSQSWPMIVALTASADEDLHERCMQIGISGIIRKPVMLQEIASELRRILMHAQKRSPMRGERL 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01593 766 SUPERFAMILY GAF domain-like 186 331 - -
Accr12g01593 766 CDD REC_ETR-like 633 748 - -
Accr12g01593 766 ProSiteProfiles Response regulatory domain profile. 634 752 IPR001789 GO:0000160
Accr12g01593 766 Gene3D - 428 608 IPR036890 -
Accr12g01593 766 Pfam GAF domain 182 328 IPR003018 GO:0005515
Accr12g01593 766 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 350 429 IPR036097 GO:0000155|GO:0007165
Accr12g01593 766 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 757 - -
Accr12g01593 766 FunFam Ethylene receptor 4 331 425 - -
Accr12g01593 766 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 431 589 IPR036890 -
Accr12g01593 766 Pfam Response regulator receiver domain 635 747 IPR001789 GO:0000160
Accr12g01593 766 SMART REC_2 633 748 IPR001789 GO:0000160
Accr12g01593 766 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Accr12g01593 766 CDD HATPase_ETR2_ERS2-EIN4-like 470 602 - -
Accr12g01593 766 Coils Coil 334 364 - -
Accr12g01593 766 Gene3D - 330 427 - -
Accr12g01593 766 SMART gaf_1 182 338 IPR003018 GO:0005515
Accr12g01593 766 PIRSF Ethylen_sen_hybr_HK 1 759 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Accr12g01593 766 FunFam Ethylene receptor 631 755 - -
Accr12g01593 766 Gene3D - 160 329 IPR029016 -
Accr12g01593 766 Gene3D - 633 766 - -
Accr12g01593 766 SUPERFAMILY CheY-like 631 752 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01593 Accr-Chr12 24471964 24475044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01593 22 757 Miscellaneous Gene Families AT3G04580 56.208 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr12g01593 GAF 2.1e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01593 K14509 - gmx:100787425 1172.92