Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01538 ATGAGAAACTCCATACTCCATCATGTTTCTCTTCTCTTATTCTCCTTCTACATCTTCTTCCTCCTTCATCTTCCTCATCCTTCACAAGCTCAAAACCTCATACAACCCAACACCACCGGCTACCAGTGCCCCGGCAATCAGACCACCGGCTCCGGCTATCCCTGCCGGACCTACGCCTTCTACCGAGCTTCAGCCCCTAATTTCCTCGACCTCGCTTCCATTGGTGACCTCTTCTCCGTTAGCCGACCCATGATTGCAGATCCAAGCAATATTTCTACTCCTAATTCAACTTTAGCCCCGAATCAACCCCTCTTCATTCCCCTATCTTGCTCCTGCAACTTCATCAACTCAACCTTCGGTTCCATCTCTTACGCCAATCTCTCCTACACCATCAAGAAAGGAGACACGTTCTACCAAGTCTCCTCTTTTAGTTACATGAACCTCACGACCTTCCAATCCGTCGAAGTCGTAAACCCTACCCTCATCCCGGAGAATTTGACGATCGGCGTTAGCGCCGTGTTCCCTGTGTTCTGCAAATGCCCTAACACCACTCAATTGCAAAACGGCGAGAACATCCTGATTTCCTACGTCGTTCAACCGTCCGATAACGTATCGTCGATTGCCTCCTTTTTTGGATCGAAACCGCAGTCAATAATTGATGCTAACAGTAAAGGTTTCCGAGAATTTGACACTATCTTCGTTCCGGTATCCCGATTGCGGGTGCTGACTCAGATTCCGGTCAACACTTCGGCGTCGCCGCCTTCGCCTGCTGCTGCAACACCTGTAACTTCCGGCGGCGACAGAACAGGAACTGTGAGAGGATTGGCGATTGTGCTAGGGATTTTGGGGTTACTGTTGATTCTGCTATTGGGGATGTGGGTTTACAGGGAGCGTTTGTCCAAGGACAGATTGGCGACGGTGATCGGAGATGAAGAGAGGCGGAAGCAGAGCTTTATGAAGGAGACGAAGAAGGGATCGAAGGAAGAGGAGGCGAAATTGATGGCGAATGTGTCGGATTGTTTGGATAAGTATAGGGTTTTTGAGTATGAAGAACTGAGAGAAGCCACCCATGATTTTGATCAGAGCTGCTTGATTCTTGGGTCTGTGTACAAAGGAACCATTGATGGAGAGGTCTATGCGATAAAGAAGATGAAGTGGAATGCTTACGAGGAACTCAAGATCTTACAGAAGGTGAACCATGGGAATTTGGTGAAGTTAGAGGGCTTTTGCATTGACGACGATGAAGCAAACTGCTATCTAGTCTATGAATATGTTGAAAACGGATCCCTCTACTCGTGGCTGCACGAAGACCGGACCCAACGGTTGAACTGGAAGATGAGGCTACATGTGGCCATGGATGTAGCCAATGGCTTGCAATACATCCACGAGCACACAAGGCCAAGGGTTGTGCACAAAGACATCAAGAGTAGCAACATCCTCTTGGATGCCAACATGAGAGCCAAGATAGCCAATTTCGGACTCGCAAAGTCTGGAATCAATGCCATCACGATGCACATCGTGGGGACTCAGGGTTACATAGCTCCTGAATATCTTGCTGATGGTGTGGTATCGACTAAGATGGATGTGTTCTCCTTTGGAGTAGTTCTTCTTGAACTGATCACAGGCAAAGAAGCCGTCGATGACAGAGGGAATCCCTTGTCGACGAGTGTGGTAAGAGCTTTTGAAGTGGGTATTAGTGAGCAAGAGAAGGGCAGGAGACTAAGGGAATGGTTGGATGGTTCCCTTATGAGAGAAACATTGTCAATGGAGAGTCTAATGGGTGTGCTTAATATTGCCCTTGCTTGCTTGCATAAGGATCCAACAAAGAGGCCAAGCATGGTGGATATTGTTTATGCTTTGAGCAAAAGTGAAGAATCCAATTTTGATACCTCCGATGATACCATAGATTCTCCATTGGTATCCGCAAGGTGA 1932 0.4772 MRNSILHHVSLLLFSFYIFFLLHLPHPSQAQNLIQPNTTGYQCPGNQTTGSGYPCRTYAFYRASAPNFLDLASIGDLFSVSRPMIADPSNISTPNSTLAPNQPLFIPLSCSCNFINSTFGSISYANLSYTIKKGDTFYQVSSFSYMNLTTFQSVEVVNPTLIPENLTIGVSAVFPVFCKCPNTTQLQNGENILISYVVQPSDNVSSIASFFGSKPQSIIDANSKGFREFDTIFVPVSRLRVLTQIPVNTSASPPSPAAATPVTSGGDRTGTVRGLAIVLGILGLLLILLLGMWVYRERLSKDRLATVIGDEERRKQSFMKETKKGSKEEEAKLMANVSDCLDKYRVFEYEELREATHDFDQSCLILGSVYKGTIDGEVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDDDEANCYLVYEYVENGSLYSWLHEDRTQRLNWKMRLHVAMDVANGLQYIHEHTRPRVVHKDIKSSNILLDANMRAKIANFGLAKSGINAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELITGKEAVDDRGNPLSTSVVRAFEVGISEQEKGRRLREWLDGSLMRETLSMESLMGVLNIALACLHKDPTKRPSMVDIVYALSKSEESNFDTSDDTIDSPLVSAR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01538 643 SUPERFAMILY Protein kinase-like (PK-like) 342 620 IPR011009 -
Accr12g01538 643 Gene3D Phosphorylase Kinase; domain 1 328 424 - -
Accr12g01538 643 Gene3D Transferase(Phosphotransferase) domain 1 425 638 - -
Accr12g01538 643 Pfam LysM domain 196 228 IPR018392 -
Accr12g01538 643 SMART serkin_6 359 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01538 643 ProSiteProfiles Protein kinase domain profile. 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01538 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Accr12g01538 643 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 626 - -
Accr12g01538 643 Pfam Protein kinase domain 367 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01538 643 FunFam PTI1-like tyrosine-protein kinase 3 425 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01538 Accr-Chr12 22873971 22877191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01538 11 622 Receptor kinase-like Gene Family AT2G23770 33.696 2.48e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr12g01538 Pkinase 4.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01538 - - lang:109352405 843.958