Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01537 ATGAGAAACTCCATACTCCATCATGTTTCTCTTCTCTTATTCTCCTTCTACATCTTCTTCCTCCTTCATCTTCCTCATCCTTCACAAGCTCAAAACCTCATACAACCCAACACCACCGGCTACCAGTGCCCCGGCAATCAGACCACCGGCTCCGGCTATCCCTGCCGGACCTACGCCTTCTACCGAGCTTCAGCCCCTAATTTCCTCGACCTCGCTTCCATTGGTGACCTCTTCTCCGTTAGCCGACCCATGATTGCAGATCCAAGCAATATTTCTACTCCTAATTCAACTTTAGCCCCGAATCAACCCCTCTTCATTCCCCTATCTTGCTCCTGCAACTTCATCAACTCAACCTTCGGTTCCATCTCTTACGCCAATCTCTCCTACACCATCAAGAAAGGAGACACGTTCTACCAAGTCTCCTCTTTTAGTTACATGAACCTCACGACCTTCCAATCCGTCGAAGTCGTAAACCCTACCCTCATCCCGGAGAATTTGACGATCGGCGTTAGCGCCGTGTTCCCTGTGTTCTGCAAATGCCCTAACACCACTCAATTGCAAAACGGCGAGAACATCCTGATTTCCTACGTCGTTCAACCGTCCGATAACGTATCGTCGATTGCCTCCTTTTTTGGATCGAAACCGCAGTCAATAATTGATGCTAACAGTAAAGGTTTCCGAGAATTTGACACTATCTTCGTTCCGGTATCCCGATTGCGGGTGCTGACTCAGATTCCGGTCAACACTTCGGCGTCGCCGCCTTCGCCTGCTGCTGCAACACCTGTAACTTCCGGCGGCGACAGAACAGGAACTGTGAGAGGATTGGCGATTGTGCTAGGGATTTTGGGGTTACTGTTGATTCTGCTATTGGGGATGTGGGTTTACAGGGAGCGTTTGTCCAAGGACAGATTGGCGACGGTGATCGGAGATGAAGAGAGGCGGAAGCAGAGCTTTATGAAGGAGACGAAGAAGGGATCGAAGGAAGAGGAGGCGAAATTGATGGCGAATGTGTCGGATTGTTTGGATAAGTATAGGGTTTTTGAGTATGAAGAACTGAGAGAAGCCACCCATGATTTTGATCAGAGCTGCTTGATTCTTGGGTCTGTGTACAAAGGAACCATTGATGGAGAGGTCTATGCGATAAAGAAGATGAAGTGGAATGCTTACGAGGAACTCAAGATCTTACAGAAGGTGAACCATGGGAATTTGGTGAAGTTAGAGGGCTTTTGCATTGACGACGATGAAGCAAACTGCTATCTAGTCTATGAATATGTTGAAAACGGATCCCTCTACTCGTGGCTGCACGAAGACCGGACCCAACGGTTGAACTGGAAGATGAGGCTACATGTGGCCATGGATGTAGCCAATGGCTTGCAATACATCCACGAGCACACAAGGCCAAGGGTTGTGCACAAAGACATCAAGAGTAGCAACATCCTCTTGGATGCCAACATGAGAGCCAAGATAGCCAATTTCGGACTCGCAAAGTCTGGAATCAATGCCATCACGATGCACATCGTGGGGACTCAGGGTTACATAGCTCCTGAATATCTTGCTGATGGTGTGGTATCGACTAAGATGGATGTGTTCTCCTTTGGAGTAGTTCTTCTTGAACTGATCACAGGCAAAGAAGCCGTCGATGACAGAGGGAATCCCTTGTCGACGAGTGTGGTAAGAGCTTTTGAAGTGGGTATTAGTGAGCAAGAGAAGGGCAGGAGACTAAGGGAATGGTTGGATGGTTCCCTTATGAGAGAAACATTGTCAATGGAGAGTCTAATGGGTGTGCTTAATATTGCCCTTGCTTGCTTGCATAAGGATCCAACAAAGAGGCCAAGCATGGTGGATATTGTTTATGCTTTGAGCAAAAGTGAAGAATCCAATTTTGATACCTCCGATGATACCATAGATTCTCCATTGGTATCCGCAAGGACTGGAGGGAGTATATTCTTATAA 1953 0.4757 MRNSILHHVSLLLFSFYIFFLLHLPHPSQAQNLIQPNTTGYQCPGNQTTGSGYPCRTYAFYRASAPNFLDLASIGDLFSVSRPMIADPSNISTPNSTLAPNQPLFIPLSCSCNFINSTFGSISYANLSYTIKKGDTFYQVSSFSYMNLTTFQSVEVVNPTLIPENLTIGVSAVFPVFCKCPNTTQLQNGENILISYVVQPSDNVSSIASFFGSKPQSIIDANSKGFREFDTIFVPVSRLRVLTQIPVNTSASPPSPAAATPVTSGGDRTGTVRGLAIVLGILGLLLILLLGMWVYRERLSKDRLATVIGDEERRKQSFMKETKKGSKEEEAKLMANVSDCLDKYRVFEYEELREATHDFDQSCLILGSVYKGTIDGEVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDDDEANCYLVYEYVENGSLYSWLHEDRTQRLNWKMRLHVAMDVANGLQYIHEHTRPRVVHKDIKSSNILLDANMRAKIANFGLAKSGINAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELITGKEAVDDRGNPLSTSVVRAFEVGISEQEKGRRLREWLDGSLMRETLSMESLMGVLNIALACLHKDPTKRPSMVDIVYALSKSEESNFDTSDDTIDSPLVSARTGGSIFL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01537 650 SUPERFAMILY Protein kinase-like (PK-like) 342 620 IPR011009 -
Accr12g01537 650 Pfam LysM domain 196 228 IPR018392 -
Accr12g01537 650 Pfam Protein kinase domain 367 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01537 650 SMART serkin_6 359 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01537 650 ProSiteProfiles Protein kinase domain profile. 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01537 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Accr12g01537 650 Gene3D Transferase(Phosphotransferase) domain 1 425 640 - -
Accr12g01537 650 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 626 - -
Accr12g01537 650 Gene3D Phosphorylase Kinase; domain 1 294 424 - -
Accr12g01537 650 FunFam PTI1-like tyrosine-protein kinase 3 425 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01537 Accr-Chr12 22873971 22877464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01537 11 622 Receptor kinase-like Gene Family AT2G23770 33.696 4.44e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr12g01537 Pkinase 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01537 - - lang:109352405 843.958