Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01502 ATGGCTATGGCATTTGTGACCGATTTGGAGAAAATACAGACACTTCTGAGTGCCCCAAAGAATCTGAGCAAACCCAACAAAAAATGGCATTCTGCATTTGTTAGTATTTATTGTTACAGGACTCTCTTGTCTCACATCAAGAACAACAAGCCTAAAAAGTTGTCACCTTCTTCCTCCTACACTGTCATCGATTTAAACCCAGATCATTCCTTTACTGTAAGCCAAACCACCCTCACAAATCTCGTGAAGGAGAAAAACGTGGAAACCCTGCAAACTCTTGGTGGGGTCCATGGTGTGGCCTCTGCTCTAAAAACCGACATTCAAAATGGAGTCAAAGGCGGTGATGGTGATGACGATCCCGATGACGTCCTGCGACGGCGCGACGCGTTTGGTTCTAATACCTATCCAAAACCACCTACGAGAGGTTTCTTTCATTTTGTGATTGAAGGATTTAAGGACCCCACCATTCTTATTCTTTTAGTTTGTGCTGCTCTGTCCCTTGGCTTCGGCATCAAGGAGAAGGGAATCAAGGAAGGCTGGTATGAAGGTGGAAGCATCTTCGTCGCCGTTTTTCTTGTCATTGCTGTATCTTCCATTAGTAATTTCAGGCAGAGCAGACAGTTTGACAAGCTGTCCCAGGTCAGCAATAACATCCAAGTCGATGTTGTACGAAGTGGGCGCAGGCAACATGTTTCCGTATATGACATCGTGGTCGGTGATGTTGTGTGGCTCAAGATCGGAGACCAGGTTCCTGCTGATGGCTTGTTCTTGGAAGGCCATTCCCTGCAAGTTGATGAGTCAAGCATGACAGGTGAGAGTGACCACGTAGAGATTAATGGCGACAAAAATCCATTTTTGTTCTCTGGGACTAAGGTGGCTGATGGGTTTGCCAAAATGCTCGTCACTTCTGTTGGTACGAACACCACATGGGGTCAGATGATGGGTACAATAAGCAGAGACAACAATGAAGAAACCCCGTTGCAGGAACGCCTCAATAAGCTTACTTCTGCCATAGGAAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTTATGTTGGTTCGCTACTTCACAGGGAACACAACTGATGAGAATGGGAACAAAGAGTTCAACGGAAGCAGCACTAAGTTTAATGACATAATGAATGGAGTTGTGGATATTGTTGCTGCTGCTGTTACTATTGTTGTGGTTGCCATTCCAGAAGGGCTTCCTTTGGCTGTGACTTTGACGCTTGCTTACTCCATGAAGAAGATGATGGCTGATATGGCTATGGTGAGGAAGCTCTCTGCCTGCGAGACGATGGGTTCTGCTACAACCATCTGTACTGATAAGACTGGCACTCTCACGCTTAATCAGATGAAAGTGACTAAGTTCTGGCTTGGACAAAAACCTATGGAAGAAAAACCTCGTGAATCATCAGTTCATTTAGATGTTCTTCAATTGATCAAAGAAGGGGTTGCCCTTAACACTACAGGTAGTGTTTACAAGTCTAAATCAACAAATCTGGAATATGAGTTTTCAGGTAGTCCAACAGAAAAGGCCATTCTTTCTTGGGCTGTTCTTGATCTGAACATGAACATGGAGGAGTTGACGCAAAGTTCCACCATCCTTCATGTGGAAGCCTTCAATTCAAAGAAGAAGATGAGTGGGGTTTTGATTAGAAGAAAAGCAAACAACAAAATCCATGCACATTGGAAAGGCGCAGCTGAGATGGTACTAAGATTGTGTTCAAAGTACCATGATGCTTCTGGCAATATCAAAACTCTTGACGATGACAAGAAGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCAGCCAGCAGCCTTAGATGTATTGCCTTTGCACATACAGAAGTGGCAGAAGAAGAAGATAGAGGAAACCAAAAGGTAAAAGAAGAAGGGCTCACCCTCTTAGGACTTGTTGGTATAAAGGATCCATGTCGTCCTGGTGTCAAGAAAGCTGTACAAGATTGCCAAAATGCAGGAGTAAGTGTCAAAATGATCACAGGAGACAATGTTTTCACAGCTAAAGCCATAGCTACAGAATGTGGCATCCTCCGACCTAATCAAGACACGACCGAAGCAGTCATCGAAGGAGAGGTGTTTCGGAACTTGTCTGATGAGGAAAGACTGAGGAGAGCGGAGAAGATTTGTGTGATGGCACGATCCTCTCCGTTTGACAAGCTCCTCATGGTTCAATGCCTCAAACAGAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACTAATGATGCACCAGCATTAAAAGAAGCTGATATAGGACTTTCTATGGGGATTCAAGGCACTGAAGTTGCAAAAGAAAGCTCAGATATAGTCATCTTGGATGATAATTTCGCCTCAGTTGCCACAGTTCTAAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATTCAATTTCAGCTTACAGTAAATGTTGCTGCACTTGCAATTAACTTTGTGGCTGCAGTATCAGCAGGAGAAGTGCCATTAACAGCTGTTCAACTATTGTGGGTGAACTTGATAATGGACACTTTGGGTGCTTTAGCTCTTGCAACAGAGAAGCCTACAATGGAGTTACTGGATAAACCCCCAGTGGGTAGAACTGAGCCTCTCATCACCAACATAATGTGGAGAAATCTGTTAGCCCAAGCTCTATACCAGATCACAATTCTATTGACATTCCAGTTCAAGGGTGAGGCTATATTTAGGGTGAGTTCAAAAGTAAATGACACTTTGATTTTCAATACGTTTGTGTTATGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGCTAGAGAAGAAGAATGTGTTCCAAGGGATTCACAAGAATAAGTTATTCATAGGGATCATAGGGATAACCATTGTGCTTCAGGTGTTGATGGTGGAGTTTCTAAAGAAATTTGCAGATACTGAGAGGTTGAATTGGGGGCAATGGGGTGCATGCGTTATGATTGCAGTTATTTCTTGGCCTCTTGGTTGGGTTGTCAAGTTCATTCCAGTGCCAGAGAGACCGTTGCTCAGTTTCCTGAACATGAAGAAGCATTGA 3054 0.4361 MAMAFVTDLEKIQTLLSAPKNLSKPNKKWHSAFVSIYCYRTLLSHIKNNKPKKLSPSSSYTVIDLNPDHSFTVSQTTLTNLVKEKNVETLQTLGGVHGVASALKTDIQNGVKGGDGDDDPDDVLRRRDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKEKGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRQHVSVYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGTISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLVVMLVRYFTGNTTDENGNKEFNGSSTKFNDIMNGVVDIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQKPMEEKPRESSVHLDVLQLIKEGVALNTTGSVYKSKSTNLEYEFSGSPTEKAILSWAVLDLNMNMEELTQSSTILHVEAFNSKKKMSGVLIRRKANNKIHAHWKGAAEMVLRLCSKYHDASGNIKTLDDDKKLVFEQIIQGMAASSLRCIAFAHTEVAEEEDRGNQKVKEEGLTLLGLVGIKDPCRPGVKKAVQDCQNAGVSVKMITGDNVFTAKAIATECGILRPNQDTTEAVIEGEVFRNLSDEERLRRAEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRTEPLITNIMWRNLLAQALYQITILLTFQFKGEAIFRVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHKNKLFIGIIGITIVLQVLMVEFLKKFADTERLNWGQWGACVMIAVISWPLGWVVKFIPVPERPLLSFLNMKKH 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01502 1017 PANTHER CATION TRANSPORTING ATPASE 58 1003 - -
Accr12g01502 1017 SFLD Haloacid Dehalogenase 424 799 - -
Accr12g01502 1017 FunFam Calcium-transporting ATPase 641 791 - -
Accr12g01502 1017 PRINTS H+-transporting ATPase (proton pump) signature 778 803 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01502 1017 PRINTS H+-transporting ATPase (proton pump) signature 598 616 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01502 1017 PRINTS H+-transporting ATPase (proton pump) signature 746 762 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01502 1017 PRINTS P-type cation-transporting ATPase superfamily signature 442 456 - -
Accr12g01502 1017 PRINTS P-type cation-transporting ATPase superfamily signature 770 782 - -
Accr12g01502 1017 PRINTS P-type cation-transporting ATPase superfamily signature 265 279 - -
Accr12g01502 1017 PRINTS P-type cation-transporting ATPase superfamily signature 640 651 - -
Accr12g01502 1017 PRINTS P-type cation-transporting ATPase superfamily signature 746 765 - -
Accr12g01502 1017 PRINTS P-type cation-transporting ATPase superfamily signature 662 672 - -
Accr12g01502 1017 Gene3D - 439 791 IPR023214 -
Accr12g01502 1017 Gene3D - 121 318 - -
Accr12g01502 1017 Gene3D - 149 1001 - -
Accr12g01502 1017 Pfam haloacid dehalogenase-like hydrolase 439 760 - -
Accr12g01502 1017 Pfam Cation transporter/ATPase, N-terminus 94 166 IPR004014 -
Accr12g01502 1017 NCBIfam HAD-IC family P-type ATPase 383 476 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01502 1017 NCBIfam HAD-IC family P-type ATPase 186 359 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01502 1017 NCBIfam HAD-IC family P-type ATPase 715 827 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01502 1017 FunFam Calcium-transporting ATPase 190 318 - -
Accr12g01502 1017 SMART Cation_ATPase_N_a_2 95 171 IPR004014 -
Accr12g01502 1017 Pfam E1-E2 ATPase 219 420 - -
Accr12g01502 1017 SFLD p-type atpase 424 799 IPR044492 -
Accr12g01502 1017 SUPERFAMILY Calcium ATPase, transmembrane domain M 94 1003 IPR023298 -
Accr12g01502 1017 NCBIfam calcium-translocating P-type ATPase, PMCA-type 69 1003 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Accr12g01502 1017 Pfam Cation transporting ATPase, C-terminus 831 1001 IPR006068 -
Accr12g01502 1017 SUPERFAMILY HAD-like 440 851 IPR036412 -
Accr12g01502 1017 Gene3D - 452 647 IPR023299 GO:0000166
Accr12g01502 1017 ProSitePatterns E1-E2 ATPases phosphorylation site. 444 450 IPR018303 -
Accr12g01502 1017 SUPERFAMILY Calcium ATPase, transduction domain A 217 316 IPR008250 -
Accr12g01502 1017 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 448 652 IPR023299 GO:0000166
Accr12g01502 1017 FunFam Calcium-transporting ATPase 763 1005 - -
Accr12g01502 1017 FunFam Calcium-transporting ATPase 452 647 - -
Accr12g01502 1017 CDD P-type_ATPase_Ca_PMCA-like 123 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01502 Accr-Chr12 21235743 21238796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01502 12 1017 Primary Pumps ATPases AT3G22910 69.329 0.0 1346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01502 K01537 - gmx:100793918 1533.85