Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01495 ATGCCGGTGACGCAAATGAAAGAGAGCTCGGAGCAGCATCTTGTGATCAAAACCCACTTGCAGAACTCCATAAATCCGGCGAAGAAAGCACCCAAAACGGTCCAAAATGGCAAAGGTCCACCACCACCACCTCAAGAACCTCACAACGCCAAATCCCATAATAGCCAGAGCCAAACTCCACCTTCGGCTAAGAACAGAGGAAGAAGAAGGAGCCGGGGGGGCCGAAAGTCCGATCAAGGCGATGTTCCGATGCGGCCTGCTTGTCGACCCTGCACTGTGGCTAATAAACCGCTATCAGAAAACCCGGGTCAGATTCTGGTATCAAGTACTGTAAATGGGCCTTTTGTTGAAAATGGCGGCAACAGCAACTCTTGTGATGTTGTGATGGGGTTCCCTACCTCAAGTAAATCTTTGAGCTTCGCTCCTAGGCCTGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGAGTTACCGGACAAGGACTTGAACCAGTATGATGTCACTATTACCCCAGAAGTGTCGTCTAGAACAGTAAACAGGACCATCATGGCGGAACTTGTGAGACTGTACAAAGATTCTGACTTGGGGATGAGGCTCCCTGCATATGATGGCAGAAAAGGTCTGTACACAGCAGGAGAGCTTCCCTTTGCTTGGAGAGAGTTTAAAATTAAGCTTGTAGATGAAGACGATGGAGTTAATGGTCCCAAAAGGGAAAGAGAATACAAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTTTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAGATTCTTGACATTGTACTAAGAGAGCTATCGACCAAGAGGTTTTGCCCCGTTGGGAGATCCTTCTTTTCACCCAATATTAGAACACCTCAAAGGCTTGGAGAGGGATTGGAATCTTGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCCTCAGCTGCGTTTATTGAGCCTCTTCCTGTGGTGGAATTTGTTGGTCAGCTGTTGGGAAAAGATGTGTTGTCAAGGCCATTGTCAGATGCTGATCGTGTAAAGATTAAGAAAGCCCTTCGAGGAGTTAAAGTTGAAGTAACACACAGAGGGAGTGTACGAAGGAAATATCGTGTTTCAGGGTTGACATCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGACAACTCAACTATGAAATCAGTAGTTGAGTACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTACCTTGCCTTCAAGTGGGAAACCAAAAGAAGGCGAACTATTTGCCTATGGAGGCATGCAAAATTGTTGAGGGGCAACGGTATACAAAAAGGTTGAACGAGAAGCAAATTACTGCTTTGCTGAAAGTCACTTGTCAGAGACCCCGTGATCGTGAAAATGACATTTTGCGGACCATCCAACATAATGCTTTTGATCAAGATCCTTATGCAAAGGAGTTTGGGATTAAGATCAGTGAAAAATTAGCTTCTGTTGAAGCAAGAATTCTTCCGGCCCCATGGTTGAAATATCATGACACTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGCATGACCGTTAGCCGGTGGGCATGCATAAATTTTTCACGAAATGTGCAAGATAGTGTTGCTCGCAGTTTTTGTAGTGAACTTGCTCAGATGTGTGAAGTATCTGGCATGGAATTTAGTCCAGAGCCTGTTATCCCAATATATAATGCCAAGCCTGAGCAAGTGGAGAAAGCTCTTAAGCACGTTTATCATGTTTCGATGAACAAAACCAAGGGAAAGGAGTTAGAGCTTCTATTAGCAATATTGCCTGACAACAATGGCTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACTGATCTTGGTTTAATTTCTCAATGCTGCCTGACAAAGCACGTCTTTAAGATCACTAAACAGTATCTGGCTAATGTGTCTCTGAAGATTAATGTTAAGATGGGGGGTAGAAACACTGTTCTCCTTGATGCTATAAGCTGCAGAATACCATTGGTTAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACCCACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATTGCAGCTGTAGTAGCTTCCCAAGACTGGCCTGAAGTGACTAAATATGCTGGTTTAGTGTGTGCTCAAGCTCACAGACAAGAACTCATTCAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGCACGGTTAGCGGTGGCATGATCCGAGACTTGTTGATCTCCTTTAGAAAGGCAACTGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAATTTTATCAAGTTCTGCTTTATGAGTTAGATGCAATCCGGAAGGCTTGTGCTTCCTTGGAGCCAAACTATCAGCCTCCAGTTACTTTTATTGTGGTACAAAAAAGACATCACACTAGGTTGTTTGCAAACAACCACAGAGACAAGAGCAGTACAGATAGAAGTGGGAATATATTGCCAGGAACCGTTGTTGATTCTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTTTGCAGTCATGCTGGTATTCAGGGGACTAGCCGGCCAGCTCATTATCACGTCCTTTGGGATGAAAACAACTTTACAGCAGATGGAATTCAGTCTTTAACAAACAATCTATGTTATACATATGCTAGGTGTACACGTTCTGTATCTGTTGTTCCTCCGGCATATTATGCTCATCTAGCAGCATTTCGTGCCCGGTTTTACATGGAGCCAGACATGCAAGAGAATGGCTCTACCGGTGGGGGTAGCATGGGTCATGGTTCCAAAGCATCGCGAGCAGCTGGAGAATTTGGGGTCCGGCCGTTGCCAGCCTTGAAAGAAAACGTGAAGAAGGTAATGTTCTATTGTTAG 3012 0.4406 MPVTQMKESSEQHLVIKTHLQNSINPAKKAPKTVQNGKGPPPPPQEPHNAKSHNSQSQTPPSAKNRGRRRSRGGRKSDQGDVPMRPACRPCTVANKPLSENPGQILVSSTVNGPFVENGGNSNSCDVVMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRTIMAELVRLYKDSDLGMRLPAYDGRKGLYTAGELPFAWREFKIKLVDEDDGVNGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRFCPVGRSFFSPNIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAFDQDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRNVQDSVARSFCSELAQMCEVSGMEFSPEPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGSMGHGSKASRAAGEFGVRPLPALKENVKKVMFYC 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01495 1003 Pfam PAZ domain 374 478 IPR003100 GO:0005515
Accr12g01495 1003 SUPERFAMILY Ribonuclease H-like 626 958 IPR012337 -
Accr12g01495 1003 MobiDBLite consensus disorder prediction 1 103 - -
Accr12g01495 1003 CDD PAZ_argonaute_like 347 461 - -
Accr12g01495 1003 Gene3D paz domain 341 466 - -
Accr12g01495 1003 Pfam N-terminal domain of argonaute 152 286 IPR032474 -
Accr12g01495 1003 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 131 958 - -
Accr12g01495 1003 Pfam Piwi domain 637 956 IPR003165 GO:0003676
Accr12g01495 1003 SMART PAZ_2_a_3 352 484 IPR003100 GO:0005515
Accr12g01495 1003 Gene3D - 705 1003 IPR036397 GO:0003676
Accr12g01495 1003 ProSiteProfiles Piwi domain profile. 636 957 IPR003165 GO:0003676
Accr12g01495 1003 FunFam Protein argonaute-2 341 467 - -
Accr12g01495 1003 Pfam Argonaute linker 2 domain 488 534 IPR032472 -
Accr12g01495 1003 FunFam Argonaute 10 526 699 - -
Accr12g01495 1003 SUPERFAMILY PAZ domain 342 501 IPR036085 GO:0005515
Accr12g01495 1003 CDD Piwi_ago-like 506 956 IPR045246 -
Accr12g01495 1003 SMART Piwi_a_2 636 957 IPR003165 GO:0003676
Accr12g01495 1003 MobiDBLite consensus disorder prediction 49 64 - -
Accr12g01495 1003 ProSiteProfiles PAZ domain profile. 348 462 IPR003100 GO:0005515
Accr12g01495 1003 Pfam Mid domain of argonaute 545 622 IPR032473 -
Accr12g01495 1003 SMART DUF1785_2 295 347 IPR014811 -
Accr12g01495 1003 Gene3D - 526 699 - -
Accr12g01495 1003 MobiDBLite consensus disorder prediction 1 30 - -
Accr12g01495 1003 FunFam protein argonaute 10-like 705 1003 - -
Accr12g01495 1003 Pfam Argonaute linker 1 domain 296 345 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01495 Accr-Chr12 21053110 21061392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01495 1 1003 Eukaryotic Initiation Factors Gene Family AT5G43810 81.467 0.0 1668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01495 K11593 - cave:132176966 1822.36