Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01494 ATGAAACTTCTTCAGTCCGAGGAAACGGCCTCTGAGGCTTGCGACTTTCCTGAGGAAACCCCAGAAGAGAAACCCCCGAGTTCTTCTGTGGTTGAAGGCAATGACCGTTGCCTTGATAATGGTGATGCGGTTCTCGATGTCTTCGGGAAAACCGTGGACTTCCCGGTATTGGAGAACGCAGAAGACTCCGTGGAGGCCTTGTATTTTTATAAGAATGTTTTCAATTTGATTCCCAAGTCTCTGGGAGGTCATGGGCGCTTGAAGACATTGAAGTTCTTCGGGAATGAGATTAATTTATTTGCCCCGGAGTTTGAAAACTTGATGGGCTTGGAGTGCTTGCAGATGAAGATATCTTCTCCCGGGATTGGTGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAGGAGTTAGAATTGTCCAAAGTGCCTCCAAGACCTTCTGCTTTCCCTATATTGAGCGAGATTGCTGGTCTTAAGTCCTTGACCAAGCTATCTGTTTGCCACTTTTCTATAAGATACCTTCCTCCTGAAATTGGTCTCTTAAAGAAACTAGAGTATCTTGATCTTTCATTCAATAAGATGAAGACACTGCCCTCCGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTTCCATCAACTATGGCCTCTCTGTCTGGGCTGGAGAACCTGGACCTGTCAAATAATAGGTTGACTTCATTGGGGCCTCTTGAACTTGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGTTCAATAAGCTGCGGAACTTACTTCAAATACCTTCATGGATTTGCTGTAACATGGAAGGAAATGACAAAGGTGACTGCAGCGATGATTTTAGTAATTCTTCTGTTGAAATGGATGTCTATGAAACTAGTTCACTGGAGACTTATGGACTACTTCCACATGGATCTTGTAATAGCTCATCAAACCTATTAACTAGCGCCTCATCTAGCAGTAGATGTTTTGCAACCCAGAAATCAGGTAAAAGGTGGAAGCGGCGGCACTACTTACAGCAGAAAGCCCGTCAAGAGTGTTTAAACAACAGCAGGAAGTGGAAAGGTTTAAATAATTCACAACTGAGTGAGGAGAGGCATAGAATTTGTGAATCAGAAAACCAAGGCAGTCTTGCTCCTGAAAACTGCAGCAAAACTTGTCCATTGGACAGTGTGGGTCTGGACGATGAAGCTAAAAAGATGGTGTCAGAGGAAGCTGGAGATGACAGTGTAATTGATGATGTTAACAACGATGAAGTGGGTGTTGAAAAGCAGTTTTCTAAGGGTTGCTGTTCTAGTGAAAGGGAAGATGAAAAAGATGCTTCCTTATACCACTTGGAGAATGGACCTAGTGGGCAGGACGATGCATCAAGTTCAGAATCTTTAAAGCATATTTCCAAATCAAAGAGGTATTCAGATAGGGATCTTGATAATCCTAAACCATGTAAGTCTAGAAAACCAATTGGTGATAGCACATCATTGTCCTACAAGTACAGTAGATTATCATTTTGTGGCACCGAAGACCATCTGCCAGATGGCTTTTATGATGCTGGACGTGATCGACCATTTATGCCCCTTGAGAGTTATGAGCAAAATCAGGGTTTTGCCTCTCGTGAAGTCATCTTATTGGACAGAGAAAGGGATGAAGAACTGGATGCAATTACACTCTCTGCTCAGTCGTTGGTTGTTTATTTGAAGCAGTTAAATGATTTTAACAAACATGGGAATCAAGCTGCTCCTGATAGCTTCCAGGTTGCTTCGCTGCTCGCACTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAGGTGCTATTGTAGAAAGGACACGAAAATTGGTTTCTGGTTCAAATTATCACAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAAGAGTGATATTAGTGCTTCCTCTATACCAGTTGTCAACAGTGTAGAGGACATTACTCTTACTAATATCTGTGAAAAATCTCTCGGGTCTATCAAAAGAAGACGAAGTTCAGTCATAGTTCCCATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTCTGCTTTTGAAGTATTTATGTGATCGCATGGAGCCTCCAGTACCTTGTGAGCTTGTCAGGGGTTTCTTGGATTTTTCACCACATGCCTGGAACATCATCGTAGTTAACAGAGGTGATACCCAGGTTAGAATGTTAGTTGATGCATGCCGGCCCCATGATATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGTATATACCTCTAAACCGAACCAAAGTTCCTCTTTCTCCTGATGGAATTCCTGGACCTGGTTGTTCATTTCCATCTCTCTCTACATGTGACGAATTTGAAAAAGCATCTTCAAGTACTTTAGTTCGGTGCAAACTTGGGTCAATTGAGGCTGCAGCAAAGGTGCGTACTCTGGAAGTGAAGGAGAGTTTGCCAGACAAAATAAAAAACTTTGAATATAATTGTTTGGGAGAAGTGAGAATTTTAGGTGCTCTGAAACATCCCTGTATAGTTGAAATGTATGGACACCAAATATCTCACAAGTGGACTTTTTCAGAGGATGGTAATCCTGAGCATTGTGTATTAAGGTCTGCAATTTATATGGAGTACACAGAAGGGGGCTCTTTGAGAACCTATCTTGATAAGTTATCAAAAGCTGGTGAAAAGCATGTTCCAGTAGAGTTGGCTTTTTATATTGCCAAAGATGTTGCGTGTGCATTGTCAGAACTGCACTTGAAGCACATAATTCATCGCGATGTAAAAAGTGAAAACATTCTTATTGCTTTGGATAGAAAGAAAGAGGATGGCACCCCTACTGTGAAGCTGTGTGATTTTGACAGTGCAGTGCCACTAAGATCACCTTTGCATAGCTGCTGTATTGCTCATGTTGGGACACCACCTCCTTATGTATGCACTGGAACACCACGATGGATGGCTCCAGAGGTCATGCGGACTATGTATGAAGAAAATACTTATGGATTGGAAGTTGATATCTGGTCATTTGGATGCTTGCTTCTGGAGCTTCTCACACTTCGTATTCCATATTGTGGGCTGACTGATTTACAATTGCATGATATTTTACAGATGGGTAAACCCCCTCAGTTAACCGAAGAACTGGAGGCCCTGAGTTCACCAAAGGAGCCCACTATGATTCAATCCAGTGACGAGCCGGATAAATCAGATACCAAGGCAGACATGATGAAATTCCTTGTTGACTTGTTCCATAGGTGTGTGGAAGAAAATCCAGTGAAACGGCCTACAGCGAAAGAAATCTATGAAATGCTGCTTGAACAAACAGGCAGTCTAAAAGTACAAGATGTTGGGAAGAGTTAG 3360 0.4211 MKLLQSEETASEACDFPEETPEEKPPSSSVVEGNDRCLDNGDAVLDVFGKTVDFPVLENAEDSVEALYFYKNVFNLIPKSLGGHGRLKTLKFFGNEINLFAPEFENLMGLECLQMKISSPGIGGLPLHKLKGLKELELSKVPPRPSAFPILSEIAGLKSLTKLSVCHFSIRYLPPEIGLLKKLEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMASLSGLENLDLSNNRLTSLGPLELGSMHKLQNLNLQFNKLRNLLQIPSWICCNMEGNDKGDCSDDFSNSSVEMDVYETSSLETYGLLPHGSCNSSSNLLTSASSSSRCFATQKSGKRWKRRHYLQQKARQECLNNSRKWKGLNNSQLSEERHRICESENQGSLAPENCSKTCPLDSVGLDDEAKKMVSEEAGDDSVIDDVNNDEVGVEKQFSKGCCSSEREDEKDASLYHLENGPSGQDDASSSESLKHISKSKRYSDRDLDNPKPCKSRKPIGDSTSLSYKYSRLSFCGTEDHLPDGFYDAGRDRPFMPLESYEQNQGFASREVILLDRERDEELDAITLSAQSLVVYLKQLNDFNKHGNQAAPDSFQVASLLALFVSDHFGGSDRGAIVERTRKLVSGSNYHKPFVCTCSTGSKSDISASSIPVVNSVEDITLTNICEKSLGSIKRRRSSVIVPIGSVQFGVCRHRALLLKYLCDRMEPPVPCELVRGFLDFSPHAWNIIVVNRGDTQVRMLVDACRPHDIREEEDPEFFCRYIPLNRTKVPLSPDGIPGPGCSFPSLSTCDEFEKASSSTLVRCKLGSIEAAAKVRTLEVKESLPDKIKNFEYNCLGEVRILGALKHPCIVEMYGHQISHKWTFSEDGNPEHCVLRSAIYMEYTEGGSLRTYLDKLSKAGEKHVPVELAFYIAKDVACALSELHLKHIIHRDVKSENILIALDRKKEDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGTPPPYVCTGTPRWMAPEVMRTMYEENTYGLEVDIWSFGCLLLELLTLRIPYCGLTDLQLHDILQMGKPPQLTEELEALSSPKEPTMIQSSDEPDKSDTKADMMKFLVDLFHRCVEENPVKRPTAKEIYEMLLEQTGSLKVQDVGKS 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01494 1119 Gene3D Ribonuclease Inhibitor 48 285 IPR032675 -
Accr12g01494 1119 Pfam Protein kinase domain 817 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01494 1119 FunFam Leucine-rich repeat protein kinase family protein 54 295 - -
Accr12g01494 1119 FunFam Leucine-rich repeat protein kinase family protein 829 1110 - -
Accr12g01494 1119 MobiDBLite consensus disorder prediction 1050 1070 - -
Accr12g01494 1119 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Accr12g01494 1119 ProSiteProfiles Protein kinase domain profile. 783 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01494 1119 SMART LRR_typ_2 226 249 IPR003591 -
Accr12g01494 1119 SMART LRR_typ_2 250 272 IPR003591 -
Accr12g01494 1119 SMART LRR_typ_2 180 203 IPR003591 -
Accr12g01494 1119 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Accr12g01494 1119 Gene3D Transferase(Phosphotransferase) domain 1 787 1116 - -
Accr12g01494 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 924 936 IPR008271 GO:0004672|GO:0006468
Accr12g01494 1119 Pfam Ethylene-responsive protein kinase Le-CTR1 659 739 - -
Accr12g01494 1119 MobiDBLite consensus disorder prediction 468 492 - -
Accr12g01494 1119 MobiDBLite consensus disorder prediction 452 496 - -
Accr12g01494 1119 SMART LRR_sd22_2 250 271 - -
Accr12g01494 1119 SMART LRR_sd22_2 180 205 - -
Accr12g01494 1119 SMART LRR_sd22_2 226 247 - -
Accr12g01494 1119 MobiDBLite consensus disorder prediction 1 32 - -
Accr12g01494 1119 PRINTS Leucine-rich repeat signature 226 239 - -
Accr12g01494 1119 PRINTS Leucine-rich repeat signature 183 196 - -
Accr12g01494 1119 Pfam Leucine rich repeat 206 263 IPR001611 GO:0005515
Accr12g01494 1119 SMART LRR_bac_2 226 245 - -
Accr12g01494 1119 SMART LRR_bac_2 180 199 - -
Accr12g01494 1119 SMART LRR_bac_2 203 222 - -
Accr12g01494 1119 SMART LRR_bac_2 250 269 - -
Accr12g01494 1119 SUPERFAMILY RNI-like 63 281 - -
Accr12g01494 1119 SMART serkin_6 783 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01494 1119 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 110 1108 - -
Accr12g01494 1119 SUPERFAMILY Protein kinase-like (PK-like) 794 1104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01494 Accr-Chr12 20979621 20989253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01494 811 1104 MAP Kinase Kinase Kinase AT2G24360 29.492 1.43e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Accr12g01494 Pkinase 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01494 - - gmx:100811118 1519.6