Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01489 ATGACAGTAAAGCGTCTATTACGTGAAGCTGGAGGCAAATCTATTGTTCCTTTTTACCCGTACAAAGAAATAGAAAAGGCCACTAATTGTTTCTCTGAGGAGCAGAAGTTGGGAACTGGGGCGTTTGGTACGGTATATGCAGGAAGACTACACGATAACGAATTTGTTGCAATAAAAAAGATCAAGTACAGAGACACCAACAGTGTTGACGTAGTTATGAACGAGATCAAGCTTCTTTCTTCTGTGAGTCACCCTAATTTGGTGCGCCTCTTGGGCTGCTGTATAGAGGGTAGTGAGCAGATACTTGTTTACGAGTTTATGCCCAATGGAACACTATCCCAGCATTTACAAAGATTGGGGAAAACTGGACTTCCATGGACTACACGACTCACCATTGCTGCTGAAACTGCTAATGCTATAGCATATCTTCATTCTGCTATTGATCCCCCAATATATCATAGGGACATAAAATCCAGTAATATACTCTTAGATTACAGCTTCAAATCGAAAGTAGCAGATTTTGGGCTTTCTAGACTTGGCATGACAGAAATATCACATATCTCAACTGCTCCACAGGGGACTCCCGGCTACGTCGACCCTGAATACCACCAAAACTTCCATCTTTCTGATAAAAGTGACGTCTATAGTTTTGGAGTGGTTTTGGTTGAGATAATAACAGCCCTGAAAGTGGTTGATTTTGCACGACCTCACAGTGAGGTTAATTTGGCTGCACTTGCTGTGGATAGGATCAGAAGGGGTTCTGTAGATGAGATCATAGATCCTTTTCTGGAGCCTCATAGGGATGCTTGGACACTCTTCTCTGTTCACAAGGTGGCTGAACTTGCATTTAGATGCCTTGCTTATCATAGTGACATGAGGCCTACTATGTTGGAAGTAGCAGAGGAGCTAGAACAAATCAGACGCAGTGGATGGACAACAATGGAAGAAACTTTATGCACCGCATCATCGATTGGTTCCTCATGTTCATCGCCTCGTCTTGGAAGTGAGAAGTCGATGGATCGTATTATTACTCTTAAAAAAGCAGAACGGGGGAGCAAGAGTTCCATGAGTCAAAAGAGGATGCATTCTGTGGAAGAAGTGAGGCATAGCTCTCCTGTATCAATGCATGATCCGTGGTTAAGTGAACAAAGCTCACCCTCAGCAAACAGCCTGTTGGGAAATGTAGCTCAGTGA 1194 0.433 MTVKRLLREAGGKSIVPFYPYKEIEKATNCFSEEQKLGTGAFGTVYAGRLHDNEFVAIKKIKYRDTNSVDVVMNEIKLLSSVSHPNLVRLLGCCIEGSEQILVYEFMPNGTLSQHLQRLGKTGLPWTTRLTIAAETANAIAYLHSAIDPPIYHRDIKSSNILLDYSFKSKVADFGLSRLGMTEISHISTAPQGTPGYVDPEYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPHSEVNLAALAVDRIRRGSVDEIIDPFLEPHRDAWTLFSVHKVAELAFRCLAYHSDMRPTMLEVAEELEQIRRSGWTTMEETLCTASSIGSSCSSPRLGSEKSMDRIITLKKAERGSKSSMSQKRMHSVEEVRHSSPVSMHDPWLSEQSSPSANSLLGNVAQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01489 397 ProSiteProfiles Protein kinase domain profile. 31 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01489 397 MobiDBLite consensus disorder prediction 347 397 - -
Accr12g01489 397 Pfam Protein kinase domain 31 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01489 397 Gene3D Phosphorylase Kinase; domain 1 6 106 - -
Accr12g01489 397 FunFam Wall-associated receptor kinase-like 20 107 316 - -
Accr12g01489 397 MobiDBLite consensus disorder prediction 347 372 - -
Accr12g01489 397 SUPERFAMILY Protein kinase-like (PK-like) 14 304 IPR011009 -
Accr12g01489 397 FunFam Wall-associated receptor kinase-like 14 1 106 - -
Accr12g01489 397 SMART serkin_6 31 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01489 397 Gene3D Transferase(Phosphotransferase) domain 1 107 326 - -
Accr12g01489 397 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
Accr12g01489 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Accr12g01489 397 MobiDBLite consensus disorder prediction 376 397 - -
Accr12g01489 397 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 383 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01489 Accr-Chr12 20894839 20896032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01489 1 397 Receptor kinase-like Gene Family AT2G23450 68.080 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr12g01489 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01489 - - pcin:129311319 701.434