Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01475 ATGAACGCCGGCACAGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACAGAGGAAGACATTTCCCAGGTCACCCGCGAAGATTGTCGCAAGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCCTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCATACGGAGATTCCCTTTTGTTTCCGCTCAAGAAAATACCCCACCTGATAATCCAGATGTGACCGGGAGTGGCGGTGGCGGTGGCGGTAATGTCGCCGGAATTGAGGTGACATCAACTGGGCCAAGTGAAGAGCCGGCTTTCCATGCTGCCGAAGAGCTTCCCAAATCTGTGTCATCTGGAGAGAAACCAACTAACATTGAAACGAATGAGAAGGTCGTCAGTCCCAGAGAGCATGCAACTAGTGGGCCTGTTGAGCAGATGACAATTTTCTATTGTGGTAAGGTGAATGTGTATGATGGGGTGCCACCTGATAAGGCACGGGCAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCATGATGAACCACTCAAAAGAAGTACTTCAGTCTGGCCTTGCCATTTAAAGATGGATAAAGACACCCTTGTCCCATTTGATGGCACAATCTCCCAGATTGCTCAAGCAGATAAGATGGTGGAGTATCCTTTGCATTACAGGGAGAAAGGAATCTCAGCACGTGATTCTGATGGTCAGGCAAGCAGGAAAGTTTCATTGCAGCGATATTTAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATGTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATACCTCAAATGGGAACTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCTAGGTTGCCTCAAGCTTCTGGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTTCCCGTCGATCTCAACCACAAAGATTTTCAAGAATGCTAA 1032 0.4903 MNAGTATFRSILDKPLSQLTEEDISQVTREDCRKFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPIRRFPFVSAQENTPPDNPDVTGSGGGGGGNVAGIEVTSTGPSEEPAFHAAEELPKSVSSGEKPTNIETNEKVVSPREHATSGPVEQMTIFYCGKVNVYDGVPPDKARAIMQLAASPIYIPHDEPLKRSTSVWPCHLKMDKDTLVPFDGTISQIAQADKMVEYPLHYREKGISARDSDGQASRKVSLQRYLEKRKDRGRLKSKKCTGVTSSNMEMYFSHQVKAHTSNGNSSRSSTSSPPQPRLPQASGGSADNQPKIALPVDLNHKDFQEC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01475 343 Pfam tify domain 158 187 IPR010399 -
Accr12g01475 343 SMART tify_2 153 188 IPR010399 -
Accr12g01475 343 MobiDBLite consensus disorder prediction 294 324 - -
Accr12g01475 343 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 286 IPR040390 -
Accr12g01475 343 Pfam Jas motif 252 269 IPR018467 -
Accr12g01475 343 ProSiteProfiles Tify domain profile. 153 188 IPR010399 -
Accr12g01475 343 MobiDBLite consensus disorder prediction 80 153 - -
Accr12g01475 343 MobiDBLite consensus disorder prediction 294 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01475 Accr-Chr12 20285436 20290781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01475 1 292 Tify Gene Family AT4G14720 50.000 2.90e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr12g01475 tify 7.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01475 - - pcin:129296496 588.186