Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01474 ATGAACGCCGGCACAGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACAGAGGAAGACATTTCCCAGGTCACCCGCGAAGATTGTCGCAAGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCCTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCATACGGAGATTCCCTTTTGTTTCCGCTCAAGAAAATACCCCACCTGATAATCCAGATGTGACCGGGAGTGGCGGTGGCGGTGGCGGTAATGTCGCCGGAATTGAGGTGACATCAACTGGGCCAAGTGAAGAGCCGGCTTTCCATGCTGCCGAAGAGCTTCCCAAATCTGTGTCATCTGGAGAGAAACCAACTAACATTGAAACGAATGAGAAGGTCGTCAGTCCCAGAGAGCATGCAACTAGTGGGCCTGTTGAGCAGATGACAATTTTCTATTGTGGTAAGGTGAATGTGTATGATGGGGTGCCACCTGATAAGGCACGGGCAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCATGATGAACCACTCAAAAGAAGTACTTCAGTCTGGCCTTGCCATTTAAAGATGGATAAAGACACCCTTGTCCCATTTGATGGCACAATCTCCCAGATTGCTCAAGCAGATAAGATGGTGGAGTATCCTTTGCATTACAGGGAGAAAGGAATCTCAGCACGTGATTCTGATGTAGATGGTCAGGCAAGCAGGAAAGTTTCATTGCAGCGATATTTAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATGTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATACCTCAAATGGGAACTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCTAGGTTGCCTCAAGCTTCTGGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTTCCCGTCGATCTCAACCACAAAGATTTTCAAGAATGCTAA 1038 0.4894 MNAGTATFRSILDKPLSQLTEEDISQVTREDCRKFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPIRRFPFVSAQENTPPDNPDVTGSGGGGGGNVAGIEVTSTGPSEEPAFHAAEELPKSVSSGEKPTNIETNEKVVSPREHATSGPVEQMTIFYCGKVNVYDGVPPDKARAIMQLAASPIYIPHDEPLKRSTSVWPCHLKMDKDTLVPFDGTISQIAQADKMVEYPLHYREKGISARDSDVDGQASRKVSLQRYLEKRKDRGRLKSKKCTGVTSSNMEMYFSHQVKAHTSNGNSSRSSTSSPPQPRLPQASGGSADNQPKIALPVDLNHKDFQEC 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01474 345 MobiDBLite consensus disorder prediction 296 345 - -
Accr12g01474 345 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 288 IPR040390 -
Accr12g01474 345 SMART tify_2 153 188 IPR010399 -
Accr12g01474 345 MobiDBLite consensus disorder prediction 296 326 - -
Accr12g01474 345 Pfam Jas motif 254 271 IPR018467 -
Accr12g01474 345 ProSiteProfiles Tify domain profile. 153 188 IPR010399 -
Accr12g01474 345 MobiDBLite consensus disorder prediction 80 153 - -
Accr12g01474 345 Pfam tify domain 158 187 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01474 Accr-Chr12 20285436 20290781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01474 1 294 Tify Gene Family AT4G14720 50.331 5.52e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr12g01474 tify 7.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01474 - - pcin:129296496 597.045