Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01473 ATGAACGCCGGCACAGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACAGAGGAAGACATTTCCCAGGTCACCCGCGAAGATTGTCGCAAGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCCTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCATACGGAGATTCCCTTTTGTTTCCGCTCAAGAAAATACCCCACCTGATAATCCAGATGTGACCGGGAGTGGCGGTGGCGGTGGCGGTAATGTCGCCGGAATTGAGGTGACATCAACTGGGCCAAGTGAAGAGCCGGCTTTCCATGCTGCCGAAGAGCTTCCCAAATCTGTGTCATCTGGAGAGAAACCAACTAACATTGAAACGAATGAGAAGGTCGTCAGTCCCAGAGAGCATGCAACTAGTGGGCCTGTTGAGCAGATGACAATTTTCTATTGTGGTAAGGTGAATGTGTATGATGGGGTGCCACCTGATAAGTCATGTGCGGATTTGCAGGCACGGGCAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCATGATGAACCACTCAAAAGAAGTACTTCAGTCTGGCCTTGCCATTTAAAGATGGATAAAGACACCCTTGTCCCATTTGATGGCACAATCTCCCAGATTGCTCAAGCAGATAAGATGGTGGAGTATCCTTTGCATTACAGGGAGAAAGGAATCTCAGCACGTGATTCTGATGTAGATGGTCAGGCAAGCAGGAAAGTTTCATTGCAGCGATATTTAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATGTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATACCTCAAATGGGAACTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCTAGGTTGCCTCAAGCTTCTGGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTTCCCGTCGATCTCAACCACAAAGATTTTCAAGAATGCTAA 1056 0.4896 MNAGTATFRSILDKPLSQLTEEDISQVTREDCRKFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPIRRFPFVSAQENTPPDNPDVTGSGGGGGGNVAGIEVTSTGPSEEPAFHAAEELPKSVSSGEKPTNIETNEKVVSPREHATSGPVEQMTIFYCGKVNVYDGVPPDKSCADLQARAIMQLAASPIYIPHDEPLKRSTSVWPCHLKMDKDTLVPFDGTISQIAQADKMVEYPLHYREKGISARDSDVDGQASRKVSLQRYLEKRKDRGRLKSKKCTGVTSSNMEMYFSHQVKAHTSNGNSSRSSTSSPPQPRLPQASGGSADNQPKIALPVDLNHKDFQEC 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01473 351 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 294 IPR040390 -
Accr12g01473 351 MobiDBLite consensus disorder prediction 302 351 - -
Accr12g01473 351 SMART tify_2 153 194 IPR010399 -
Accr12g01473 351 ProSiteProfiles Tify domain profile. 153 188 IPR010399 -
Accr12g01473 351 MobiDBLite consensus disorder prediction 302 332 - -
Accr12g01473 351 Pfam tify domain 158 193 IPR010399 -
Accr12g01473 351 MobiDBLite consensus disorder prediction 80 153 - -
Accr12g01473 351 Pfam Jas motif 260 277 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01473 Accr-Chr12 20285436 20290781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01473 1 300 Tify Gene Family AT4G14720 49.351 2.03e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr12g01473 tify 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01473 - - pcin:129296496 608.216