Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01460 ATGGCCTCTCTTCTTCCTCAACCTCATCGTCATCGTCTTCTTAGTCTCCCAATATTTTCTGTTATCTTCTTCCTCGTTTTTCTTCTCTCCATTATCAAACCTTCTCACCAAGCTTCTTCTTCTTCTAATGTCACCGTCCCCTTAAACCCTAGACTCATCAAAGCTTACTATGCTCTTCAAGCATGGAAACATTCCATCACCTCTGATCCCAACAACTTCACCGCCAACTGGTACGGCTACCATGTGTGCAACTACAAAGGCGTTTACTGTGCACCGGCGCCTGATGATCCCCATATCTACACAGTCGCCGGCATCGACCTCAACCACGGCAACATCTCCGGCACCTTGCCGGAAGACCTCGGTCTCCTCACCGACCTCGCCCTCTTCCACCTCAACTCTAACCGCTTCTGTGGGACCCTCCCACAGAGCTTCCGTGACCTCCACCTCCTCCACGAGCTTGACGTCAGCAACAACCAATTATCCGGTCCCTTCCCCGACGTCGTTTTATTTCTCCGTTCTTTGAAGTTCCTGGACATTAGGTTCAATTCTTTCCATGGCAAAGTCCCTTCCGATCTCTTTGACCTTAAACTCGATGCCGTTTTCATAAACGACAATAAGTTTCAGTTCTCGTTGCCGAAGAATCTCGGGAATTCGCCGGTGTCTGTCTTGGTCTTCGCCAATAATAATCTCAAGGGCTGTGTTCCTGCGAGTTTGGGGAAAATGAAGGCCACGCTTAATGAGATTATTATTTCAAACAGTGGATTAAAGGGTTGTTTGCCGGAGGAGATTGGTAAATTGAATCAGGTTACGGTGTTTGATGTGAGTAATAATAATTTGGTCGGGACGTTGCCGGAATCTATTGCGGGAATGAAGAAGTTGGAGCAGTTGAATTTGGCGCATAATGAGCTCTCCGGCGAGATTCCGGCGAGTGTCTGCTCGTTGCCGAGGTTGCAGAATTTTACTTACTCCTTTAATTACTTCTGCAGCGAACCGCCTACCTGCCTGAAGTTGCGGGCGAAAGATGACCGGAAAAATTGCATTCCGTACCGGCCGTTGCAGCGGTCGGAGATGGAATGTGAAGCTTTTTATGCTCACCCGGTTGATTGTGGCGCCTTTGGATGTTCACGGCCACCTCCGCCACCTCCTCCATCTCCTCCTCCTCCATCACCCCCTCCTCCTCCACCACCTCCCCCTCCACCGCCACCTCCTCCTCCTCCACCTCCTCCGCCACCCCCTCCTCCCCCTCCTCCGCCACCACCACCTCCTCCGCCGGCGGCTCACCATTATTATTATCCGTAA 1299 0.5112 MASLLPQPHRHRLLSLPIFSVIFFLVFLLSIIKPSHQASSSSNVTVPLNPRLIKAYYALQAWKHSITSDPNNFTANWYGYHVCNYKGVYCAPAPDDPHIYTVAGIDLNHGNISGTLPEDLGLLTDLALFHLNSNRFCGTLPQSFRDLHLLHELDVSNNQLSGPFPDVVLFLRSLKFLDIRFNSFHGKVPSDLFDLKLDAVFINDNKFQFSLPKNLGNSPVSVLVFANNNLKGCVPASLGKMKATLNEIIISNSGLKGCLPEEIGKLNQVTVFDVSNNNLVGTLPESIAGMKKLEQLNLAHNELSGEIPASVCSLPRLQNFTYSFNYFCSEPPTCLKLRAKDDRKNCIPYRPLQRSEMECEAFYAHPVDCGAFGCSRPPPPPPPSPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAHHYYYP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01460 432 Gene3D Ribonuclease Inhibitor 217 348 IPR032675 -
Accr12g01460 432 SUPERFAMILY L domain-like 56 336 - -
Accr12g01460 432 Gene3D Ribonuclease Inhibitor 55 216 IPR032675 -
Accr12g01460 432 Pfam Leucine rich repeat 244 303 IPR001611 GO:0005515
Accr12g01460 432 Pfam Leucine rich repeat N-terminal domain 57 90 IPR013210 -
Accr12g01460 432 MobiDBLite consensus disorder prediction 375 422 - -
Accr12g01460 432 FunFam Leucine-rich repeat extensin-like protein 1 56 217 - -
Accr12g01460 432 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 235 330 - -
Accr12g01460 432 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 29 426 - -
Accr12g01460 432 PRINTS Proline rich extensin signature 409 425 - -
Accr12g01460 432 PRINTS Proline rich extensin signature 376 388 - -
Accr12g01460 432 PRINTS Proline rich extensin signature 388 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01460 Accr-Chr12 19941434 19942732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01460 49 382 Leucine-rich Repeat extension Gene Families AT3G22800 69.552 1.30e-164 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01460 - - gmx:100813811 555.058