Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01425 ATGGAATCGGGCACGAGATCGGCTGGCCATTCCGGGGTTTTAGTGACTAATAGAAACTCCTCTGGCTGTTTAATTGTTCAAAAGAAAGGAGATAGATTGGGTGGTGGTTTTGCTTCTTCGAGCAGTTCGCGGAAGCTGTATGAATCAAAAGTTAGGAAAAGGTCCAGTGTGGCTAAGAGTGATTCAGAATCAAGTGACGAGTTGCCGATGCCTCCAATGAGAAGGCTTGGTTCTGAGACTATTCGTGTCTGTAATGGGTTGACTGCTTTTGAGCGGGGTATAGGAGAAAGGAGTGAAACTGGTAGAAAGAGGGATAGAACGGAGCAAATCAGACGTGATGAGGATTCTGCGTTTGATAAGAATGGTTTGGAGCAGAGGGAAACAAAGAGGAATAAGCTGGACGTGTTTGATTTTGATGAATATGATGGTTTTAATGCTCAAATGACTCAAAGGAGGAAGTCTGATGATGATAATGGAGTTATTAATTTTGGAGGACGGAGGCTTAGAGAACCGATGCATGAAGCTTCTAGTGGCATTGAGAGGAAATTCGAACCAGGGTCAAGTAGTCACATTGTTTATAGTAGAAAGAGTTCTTATTATGGCAGGACTAGGGGCTTGGATCTAGGAGATAATATTAGTCAAAGCAGGTTAAAAACAAATGGGGTACCTCTGTCTTTGCTGAAAAATAAGTTTAAATCAGATGAATCCATCAGGGTTCAGGGGAAAAATGGTGTTCTAAAGGTGATGGTTAATAAGAAGAAGGCTAGCCCATCAGAGCACTATGGTCATCGCAAACCTATGGAGAGAAGACAGAGTTTGAGGACTGAGGCCACTGCCAAGAAGAACACCTTGGCAAGTCCTTCATTGTACTCAAAAACAAAACTGATTCAAAAGCCCGGTTTAGCTGTTAGACAAGAGAAAAAACAGATAGTATCAAAAAACTCATCTTCAACTAAGGACAATAAGGGTCGTGTTTGGGATACAGAGGACAGTGACTCATCATCGAATCCGGAGTTAGAAACTACGAAAACTCGCAAGTCTTTGAAGAGGGCAGGTTCTGAGGATGAACAGATTCCTTTGCGGCAGAAAGTCCCAACTACAATCATGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGTGAGGCGGGGTAGTGGCACTGAAAAACAGAAGCTGCGAGAAAAATTAAGGGAGATGTTACTGAGTGCAGGATGGACTATAGATTATCGGCCTCGAAGGAATAGAGACTATCTGGATGCAGTTTACATTAATCCAGGGGGTACGGCCTATTGGTCTATCATCAAAGCGTATGATGCTCTGCAAAAGCAATTGAATGATGATGATGAGGCCAAGCCCATGGGTGGAAGTTCTTCCTTTGCTCACATCTCAGATGAGGTGTTGAGTCAATTGACAAGGAAAACTCAGAAAAAGATGGAGAAAGAATTGAAGAAGAAGAAGAAAAATAATGGTAGTGAGAGTGAGAGTGATAGTGAAAAAGAACCCATCCATAAAAGATTTTCCAGTGACAAGCATGATATGAATAGCATGGATAGTGATAGCAATGAAGAGAAATTAAGCACCTTTATAAAGCAGGGAAGTAAGTCAATGAAAAATAAGATGACAGAAAATGGTGTTGCTAGTGCTAGCTTAAAATCCCAGAAATTTACCCGTCGCATACATGATGAAACTGACAATTCGTTGTCTGAATGTGATCCTCATCAGTCACATGTGAGGAAAAGTAGAAAACTTGGAAGATGTACTTTGTTTGTTCGGAGTTCTAGCAAGGGATTGAATTCAGAATCTGGTGGATTTGTTCCGTACACTGGCAAAAGAACAGTGCTTTCCTGGTTGATTGACTCTGGGACAGTGGCATTGAGCCAAAAGGTTCAGTATCAGAGACGAAAACGAGTAATGCTGGAGGGATGGATTGCAAATGATGGCATTCATTGTCGTTGCTGCAGTAAAATCCTCACTATTTCCAAGTTTGAGATTCATGCAGGTAGCAAATTGCGCCAGCCATTTCAAAACATATATTTGGATTCGGGAGTTTCTCTTCTACAGTGTCAAATAGATGCATGGAACAGGCAAGAGAATTCTGAGAAAATTAGTTATCATTCTGTGGATATTGATGGTGATGATCCAAATGATGACACTTGCGGTATATGTGGAGATGGTGGGGCCTTAATCTGTTGTGATGGTTGTCCATCAACATTTCACCAGAGCTGCTTGGATATTCAGATGCTTCCTCCTGGTGAATGGCTTTGCCCAAATTGCACCTGCAAATTTTGTGGAATAGCCAGTGGGAGTGTTAAAAAGGGAGGGGCTGCTGGATATGCTCTACTCACTTGCAACTTATGTGAGAAAAAATACCATGAATCTTGTGCTGAGAATATGGATGCCCTTTCTATTAACTCCAATATACTGGGCTTTTCTTTTTGTGGGAAAGAGTGCAAACAGCTTTTTGAGCATTTGAAGAAGTACCTAGGTACCAAGCATGAGCTAGAGGCAGGATTTTCATGGTTTCTCACTCATAGAACAGATGATGATTCAGAGGCAGCTGGTAGGGGAATTTTTCAAAGGGTGGAATGCAACTCCAAGCTAGCTGTTGCACTGACTATCATGGATGAATGCTTTTTACCTGTCGTTGACCGGAGGAGTGGGATCAATTTAATTCATAATGTTTTATATAATACTGGGTCAAACTTCAGTAGGTTGAACTATAAGGGTTTTTACACTGCTATTTTGGAGAGGGGTGATGAAATAATTTCTGCCGCATGTATCAGGTTCCATGGGACTAGGCTAGTGGAGATGCCATTTATTGGAACTCGCCATATATATAGGCGTCAGGGCATGTGCCGCCGGCTTTTTTCTGCTATTGAATCGGCCCTCCGCTCTATGAAGGTTGAGATAATGATTATTCCAGCAATTGCTGAGCTCATGCAAACATGGACAACGAATTTTGGCTTCACACATCTTGAGGAATCACTGAAGCAAGAACTGAGGTTTTTGAATATTCTGGTGTTCCCTGGGATAAATATGCTACAGAAGGTGCTAGTAGAGAAAGGTGTTGAGAAAATGGAAAATGGAGATGAAGTTAGTATCAGGCCAATATTGGCGGATAGGTCAGATGATTCCTCAAATCAACAAGACCCTGATGGAAGTGATAACGCTGAGTCAAATCCTGTCAATGAGATAAATGATGAATGTATCGATGCTTCTCAAGAGATGGAAGATCAGGTTTTATCTGACAGGACTGTGTGCTCCAAATCTAATTCTGAGGATAGGTCATCTGACTCGTCTGCAGATAAATGTTCTTCTCCCTCTAGTACAAACCATGTTGCACTGGATATGGAAAATCCCGTGGAAGATGATTTGAATGCATCTGGCAAAAGTCAGGTCATTTCTCTGAATGATACTTCTATTGATGTACATCGGGCAGATGCTCCAGATTGCCCTGAAAATAGTACTTTGGTTCCAGAAACTGCTCCTTCTGATCGTAATTTGACAGAAGACCTGCTTGAGCCTGTTTCGGATCAGAAAAGTCACTTGCCCACTGCTGTAAATGGTGGTTCATCTGAGAATGAGATGAACCCAGTGGTGGATAATATGGTGTCACCTGGAGAGTTTGGCATGAATAATACTCGACAGGTTCATAAGGTTGTTCCTCCAGGTGGGTTATCTGAAGAAAATATTACCACTCGGAGCTCTGATTCTATTCTCAATCATGCTGATGAGAGTTCCTTGCGAATCAGTTCAGGTTTGAATAGTGAAACTCTGTGTCAAGAAAGAAACTTACACGTACACGTAGGCACAGAAGTTGCTTCAAACAATAAGCCTTCTGATGAAAATGGCGTCAATGCATCCAATGATTGTTCTGAGACTGATCAAGAGTAA 3894 0.4183 MESGTRSAGHSGVLVTNRNSSGCLIVQKKGDRLGGGFASSSSSRKLYESKVRKRSSVAKSDSESSDELPMPPMRRLGSETIRVCNGLTAFERGIGERSETGRKRDRTEQIRRDEDSAFDKNGLEQRETKRNKLDVFDFDEYDGFNAQMTQRRKSDDDNGVINFGGRRLREPMHEASSGIERKFEPGSSSHIVYSRKSSYYGRTRGLDLGDNISQSRLKTNGVPLSLLKNKFKSDESIRVQGKNGVLKVMVNKKKASPSEHYGHRKPMERRQSLRTEATAKKNTLASPSLYSKTKLIQKPGLAVRQEKKQIVSKNSSSTKDNKGRVWDTEDSDSSSNPELETTKTRKSLKRAGSEDEQIPLRQKVPTTIMKGKGKGKGKGKVRRGSGTEKQKLREKLREMLLSAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNDDDEAKPMGGSSSFAHISDEVLSQLTRKTQKKMEKELKKKKKNNGSESESDSEKEPIHKRFSSDKHDMNSMDSDSNEEKLSTFIKQGSKSMKNKMTENGVASASLKSQKFTRRIHDETDNSLSECDPHQSHVRKSRKLGRCTLFVRSSSKGLNSESGGFVPYTGKRTVLSWLIDSGTVALSQKVQYQRRKRVMLEGWIANDGIHCRCCSKILTISKFEIHAGSKLRQPFQNIYLDSGVSLLQCQIDAWNRQENSEKISYHSVDIDGDDPNDDTCGICGDGGALICCDGCPSTFHQSCLDIQMLPPGEWLCPNCTCKFCGIASGSVKKGGAAGYALLTCNLCEKKYHESCAENMDALSINSNILGFSFCGKECKQLFEHLKKYLGTKHELEAGFSWFLTHRTDDDSEAAGRGIFQRVECNSKLAVALTIMDECFLPVVDRRSGINLIHNVLYNTGSNFSRLNYKGFYTAILERGDEIISAACIRFHGTRLVEMPFIGTRHIYRRQGMCRRLFSAIESALRSMKVEIMIIPAIAELMQTWTTNFGFTHLEESLKQELRFLNILVFPGINMLQKVLVEKGVEKMENGDEVSIRPILADRSDDSSNQQDPDGSDNAESNPVNEINDECIDASQEMEDQVLSDRTVCSKSNSEDRSSDSSADKCSSPSSTNHVALDMENPVEDDLNASGKSQVISLNDTSIDVHRADAPDCPENSTLVPETAPSDRNLTEDLLEPVSDQKSHLPTAVNGGSSENEMNPVVDNMVSPGEFGMNNTRQVHKVVPPGGLSEENITTRSSDSILNHADESSLRISSGLNSETLCQERNLHVHVGTEVASNNKPSDENGVNASNDCSETDQE 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01425 1297 MobiDBLite consensus disorder prediction 1 79 - -
Accr12g01425 1297 SMART PHD_3 718 759 IPR001965 -
Accr12g01425 1297 SMART PHD_3 760 818 IPR001965 -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 472 526 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 277 293 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 1 24 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 95 126 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 1040 1063 - -
Accr12g01425 1297 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 905 995 IPR016181 -
Accr12g01425 1297 Pfam Tify domain binding domain 641 691 IPR032308 -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 1270 1297 - -
Accr12g01425 1297 CDD PHD2_CHD_II 719 758 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 253 276 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 252 390 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 447 466 - -
Accr12g01425 1297 PANTHER PHD FINGER PROTEIN 12 337 1114 IPR042163 GO:0003714|GO:0045892
Accr12g01425 1297 MobiDBLite consensus disorder prediction 1144 1197 - -
Accr12g01425 1297 SUPERFAMILY FYVE/PHD zinc finger 708 764 IPR011011 -
Accr12g01425 1297 Pfam PHD-finger 719 761 IPR019787 -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 342 357 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 484 519 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 1181 1197 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 92 126 - -
Accr12g01425 1297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 708 795 IPR013083 -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 46 61 - -
Accr12g01425 1297 ProSiteProfiles Zinc finger PHD-type profile. 716 761 IPR019787 -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 1030 1063 - -
Accr12g01425 1297 MobiDBLite consensus disorder prediction 1076 1113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01425 Accr-Chr12 19245360 19254074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01425 1 1019 PHD Transcription Factor Family AT4G14920 48.216 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr12g01425 TDBD 2.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01425 - - gmx:102666194 1447.95