Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01397 ATGTTCAGAACCAGAGACATCTCCTTCTTCATCATACTCTTCTGCGTCATTCTCCTCCCTCAATGCACGGCTCGAAACACCGTCGTCGATTCTTCGTCCCTCAAATCTGCTCCCTTATCAGATCCTTCTCAAACATTTTCGATAGCTCCCGATTCGGATCCTCTTTTGACATCTGCAGGTAGTCTCTCTGGTTCCATCGCAGAAATTCTCAAGCGAGCGATAATCCCAAAGCTCAGTCTCAATTTCTCCCCTTCACCTGAACCAAACCCTCACCCTAATCCATCTCTGAAGTCGATCTGCGATTCAACAGACTATCCTCAGATCTGCGTTTCCAGGATCTCCCCCATGCTTTCATCCGGCGGCGCGAAACCAATGTCGGTGCTCGAAGCTTCCATAAAAGCCTGCATCGAGCCGCTGCACGACGCCGTTTCGAACCTGTCTTCCTCGACTTCTGGCAAAACGACGTCGTTGGAAGATCCTTCTCATTCTCCTGCGCTAGCTGAGTGCAAGGATAACTACAAGGAAGCGTTGGATAAACTGCAAAACGCATTGGATTCACTTCAGGCGAGCCATATCGAGACGATCAAGAGCCTGTTAAGCGCTGTCGTTTTGGATATTTCGACATGCGACGATGCGTTTAAGGGCGTTAAGGAGTCACCAGTGGCTGATTTCAATAAATTGTTGGGCAAAATGGCTCGCAATTGCCTCAACGTTGCGTCGTTGATTCACCAGTAG 735 0.4912 MFRTRDISFFIILFCVILLPQCTARNTVVDSSSLKSAPLSDPSQTFSIAPDSDPLLTSAGSLSGSIAEILKRAIIPKLSLNFSPSPEPNPHPNPSLKSICDSTDYPQICVSRISPMLSSGGAKPMSVLEASIKACIEPLHDAVSNLSSSTSGKTTSLEDPSHSPALAECKDNYKEALDKLQNALDSLQASHIETIKSLLSAVVLDISTCDDAFKGVKESPVADFNKLLGKMARNCLNVASLIHQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01397 244 Coils Coil 166 190 - -
Accr12g01397 244 PANTHER PECTINESTERASE INHIBITOR-LIKE 23 237 - -
Accr12g01397 244 Pfam Plant invertase/pectin methylesterase inhibitor 96 237 IPR006501 GO:0004857
Accr12g01397 244 Gene3D Invertase/pectin methylesterase inhibitor family protein 93 243 IPR035513 -
Accr12g01397 244 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 95 242 IPR035513 -
Accr12g01397 244 CDD PMEI-like_2 93 242 - -
Accr12g01397 244 SMART PMEI_2 91 238 IPR006501 GO:0004857
Accr12g01397 244 NCBIfam pectinesterase inhibitor domain 79 238 IPR006501 GO:0004857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01397 83 219 Carbohydrate Esterase AT1G53840 36.986 2.16e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01397 - - qsa:O6P43_003669 130.183