Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01394 ATGGCATTGTGGTGGTCCGTGCTCGTTTTGGCATTCGCTTATGCCATCTGTAGGTTCCTCTTCATGCTCATTCCTCCCAAAGTTCCTTCCATAGACGTCGATGCTTCCGATGTGTTGGATGATGGAAATCAAGCGCAGGAGAATAGCTTTATATATGTACCTCCGAGGGGACAAGCGCAGCAATCAGGCAAGAAAGTTCAATGCTATGAACCTGCAACAATGAAATACTTGGGATATGTTTCGGCGCTGACACCTACTGAGGTCAAGGAGCAGGTGGCCAAGGTGAGGAAGGCACAGAAAATGTGGGCAAAAACTAGCTTCAAGCAAAGACGTCAGTTTTTGCGTATACTCTTGCAGTATATAATCAGGCATCAAGCACTTATATGCGAAATATCTTCACGTGATACGGGAAAGACCATGGTGGATGCTTCTTTAGGAGAAATAATGACAACATGTGAGAAGATCAATTGGCTACTGTCAGAGGGTGAGAAATGGCTAAAACCTGAATACCGATCTTCTGGATGTTCAATGCTTCATAAAAGAGCTAGAGTAGAATTTCACCCCCTTGGTGTTATTGGTGCCATTGTTTCATGGAACTATCCTTTTCACAACATTTTCAATCCTATGCTGGCAGCACTCTTTTCTGGAAATGGTATTGTGATTAAGATCTCAGAACATGCAAGTTGGTCTGGATGCTTTTATTACCGGATCATCCAATCAGCCCTTGCTGCCATAGGTGCTCCAGAGGATCTCGTTGAGGTGATACCAGGGTTTGCAGAGACAGGAGAAGCATTGGTCTCGTCTGTGGATAAAGTTATATTTGTTGGATCACCTGGTGTTGGTAAGATGATAATGAGAAATGCTTCTGACACGCTTATACCAGTAACTCTAGAGCTTGGTGGAAAAGACGCATTTATCGTGTGTGAAGATATAGATGTGGACCATGTTGCACAAATTGCTGTCAGAGCTGTCCTGCAGTCAAGTGGACAAAATTGTGCTGGGGCTGAGCGATTTTATGTCCACAGGGATGTCTATGCATCTTTTGTCAGTAAAGTGACCAAAATCATAAAGTCCATTACATCCGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTCTATGCGTGCATGAGCATTCTGAAAAGCTTGAAGCCCTTGTTAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGTCCGAGGAGTCTTGGGCCATATTGGTGAAGATGCAGTTGATCAGTTTTTCCCTCCGACTGTGATTGTAAATGTGAATCATTCAATGAGATTGATGCAGGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAAGAGGCTATCAAGCTCGCAAATGATTCAAAATATGGGCTTGGCTGTGCCGTTTTCTCAGGAAATCAGACCCGGGCTAGAGAAATAGCTTCACAGATACATTGTGGAGTGGCTGCAGTTAACGATTTTGCTGCAACATATATGTGTCAGTCCCTGCCATTTGGAGGTGTGAAAAATAGCGGATTTGGAAGATTTGGTGGTGTGGAGGGACTGCGAGCTTGCTGCCTTGTAAAATCAGTTGTAGAGGATCGATGGTGGCCACTTATCAAAACTAAGATACCCAAGCCTATCCAGTATCCCGTTGCCGAGAATGGATTTGAATTTCAAGAGTCACTTGTTGAAGCACTATATGGTCTCAGCATGTGGGACCGATTGCGAGCATTGGTGAATGTTTTGAAAATGCTTACTGAGCAAAACTCTCCAAGTAGCAGTAAGAAATTGAAGGATTGA 1791 0.4366 MALWWSVLVLAFAYAICRFLFMLIPPKVPSIDVDASDVLDDGNQAQENSFIYVPPRGQAQQSGKKVQCYEPATMKYLGYVSALTPTEVKEQVAKVRKAQKMWAKTSFKQRRQFLRILLQYIIRHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEKWLKPEYRSSGCSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAALFSGNGIVIKISEHASWSGCFYYRIIQSALAAIGAPEDLVEVIPGFAETGEALVSSVDKVIFVGSPGVGKMIMRNASDTLIPVTLELGGKDAFIVCEDIDVDHVAQIAVRAVLQSSGQNCAGAERFYVHRDVYASFVSKVTKIIKSITSGPPLAGKYDMGALCVHEHSEKLEALVNDALDKGAEIVVRGVLGHIGEDAVDQFFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEAIKLANDSKYGLGCAVFSGNQTRAREIASQIHCGVAAVNDFAATYMCQSLPFGGVKNSGFGRFGGVEGLRACCLVKSVVEDRWWPLIKTKIPKPIQYPVAENGFEFQESLVEALYGLSMWDRLRALVNVLKMLTEQNSPSSSKKLKD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01394 596 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Accr12g01394 596 FunFam aldehyde dehydrogenase 22A1 65 319 - -
Accr12g01394 596 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 527 - -
Accr12g01394 596 CDD ALDH_F15-22 69 531 - -
Accr12g01394 596 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Accr12g01394 596 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Accr12g01394 596 SUPERFAMILY ALDH-like 59 532 IPR016161 GO:0016491
Accr12g01394 596 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Accr12g01394 596 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Accr12g01394 596 FunFam Aldehyde dehydrogenase A 301 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01394 Accr-Chr12 18720396 18726015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01394 1 593 Aldehyde Dehydrogenase Gene Family AT3G66658 78.752 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01394 - - gmx:100802990 1095.88