Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01388 ATGGCTTCATCTTCTTCCTTGTTCATAATAAAACCATTTCTTTGTTTCATCGTGTTGTTCTTGGCATCATGCCCTAGTTATGTTCTTGGTATCTCCGAGCTCAAAGATATTGTAATAGATTCTCCTCTATTAACAAAAAATATTCCGACAAATCGAACCATTAAGGTCGATGATGAAGGCAACGGAGAATTTACATCCATTCAAGCTGCCATAGATTCTATTCCTGAAGGAAATTCTCAGTGGGTCATCATCCATGTCAGGAAAGGAGTATACAGAGAGAAGGTGACGATACCAAAGAGCAAGCCATATATATTCTTGAGAGGAAATGGGAGAGGGAGAACTGCTATGGTTTGGTCTGAGAGTTCTGTTGATAATATAGAGTCTGCAACTTTCAAAGTCGAAGCTCATAACGTCGTTGTCTTTGGAATCAGCATCAAGAATGAGGCACCTACTGGGGTTGCTTATACTTCCCAGAATCAATCAGTGGCAGTATTTGTAGGAGCAGATAAAGTGGCATTCTATCACTGTGCATTTTATAGCACTCACAACACACTCTTTGATTACAAAGGCAGACATTACTATGATGAATGTTACATTCAAGGTTCTATTGATTTCATCTTTGGCCGTGGCAGATCCCTCTTCCATAAATGTGAGATATTTGTGATAGATGATAAGAGGACGGCAATAAAGGGGTCAATCACAGCACAAAGTAGAGAGTCAGAATCGGAGAAAAGTGGGTTTGTGTTTGTGAAGGGAAAGATATATGGCATAGGAGCGGTTTACTTAGGAAGAGCCAAAGGTTCTCATTCAAGGGCGATCTTTGCCCGAGTCTATCTCTCTGCCACCATTGTTCCTGAGGGCTGGGCCCGCTGGAGTCATGCCGGCTCCACCGAGAACTTGTACCATGGCGAGTACAAGAACTTTGGACCTGGAGCTAACACAACAAAACGAGCTAGTTGGGCCAAACAACTTACTGATCAAGAAGTTGAACCCTTCATGTCTGTGGAATACATTGATGGGCAAGATTGGCTTCCTGCTTGGCTATAA 1047 0.4231 MASSSSLFIIKPFLCFIVLFLASCPSYVLGISELKDIVIDSPLLTKNIPTNRTIKVDDEGNGEFTSIQAAIDSIPEGNSQWVIIHVRKGVYREKVTIPKSKPYIFLRGNGRGRTAMVWSESSVDNIESATFKVEAHNVVVFGISIKNEAPTGVAYTSQNQSVAVFVGADKVAFYHCAFYSTHNTLFDYKGRHYYDECYIQGSIDFIFGRGRSLFHKCEIFVIDDKRTAIKGSITAQSRESESEKSGFVFVKGKIYGIGAVYLGRAKGSHSRAIFARVYLSATIVPEGWARWSHAGSTENLYHGEYKNFGPGANTTKRASWAKQLTDQEVEPFMSVEYIDGQDWLPAWL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01388 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 344 - -
Accr12g01388 348 Pfam Pectinesterase 54 340 IPR000070 GO:0030599|GO:0042545
Accr12g01388 348 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
Accr12g01388 348 Gene3D - 48 347 IPR012334 -
Accr12g01388 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Accr12g01388 348 FunFam Pectinesterase 48 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01388 Accr-Chr12 18634230 18636681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01388 7 344 Carbohydrate Esterase AT5G47500 36.000 5.43e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01388 - - csv:101215809 528.094